Pairwise Alignments

Query, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  294 bits (753), Expect = 4e-84
 Identities = 183/473 (38%), Positives = 272/473 (57%), Gaps = 29/473 (6%)

Query: 3   HILIVEDETIIRSALRRLLERNQYEV---SEAGSVQEAQERYSIPGFDLIVSDLRLPGAP 59
           ++ +V+D++ IR  + + L     +    ++A SV  A ER +    D++VSD+R+PG  
Sbjct: 5   YVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETP---DVLVSDIRMPGMD 61

Query: 60  GTELIKLAEGT----PVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILSD 115
           G  L+          PV+IMT+++ L +AV++ + GA +Y+ KPFD DE L  V R ++ 
Sbjct: 62  GIALLNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAH 121

Query: 116 HQQSAAVQAQPARSASATAAGSGRDDIGIIGHCAPMQDLFGKIRKVAPTDSNVLIQGESG 175
            Q+      +P+ + SA           IIG    MQ++F  I +++ +  +VLI GESG
Sbjct: 122 GQEQRKTSHRPSENYSAPE---------IIGEAPAMQEVFRAIGRLSRSSISVLINGESG 172

Query: 176 TGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAA 235
           TGKELVA ALH  S RA+ P I++N AAIP+ LIESELFGHEKGAFTGA+  R G  E A
Sbjct: 173 TGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQA 232

Query: 236 DGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKTG 295
           +GGTLFLDEIG++PL+ Q RLLRVL +G+  RVG   + KVDVR++AATH++L+ L   G
Sbjct: 233 NGGTLFLDEIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQG 292

Query: 296 QFREDLYYRLHVIALKLPPLRERGSDVLEIAKAFLARQGERMGSDDLHFSRDAEQAIRHY 355
           +FREDL++RL+VI + +P LRER  D+ ++ K FLA   + +G +    +      +   
Sbjct: 293 KFREDLFHRLNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKL 352

Query: 356 SWPGNVRELENAIERAAILSESPEIDAELLGIDIELDELDDDFDEPLG---SIRGIANSN 412
            WPGNVR+LEN      +++   E+    L  ++  +     FD  +     +   A S 
Sbjct: 353 DWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDISWQKQLETWAKSA 412

Query: 413 EPTEDLSLEDY----FQHFVLEHQDHMT---ETELARKLGISRKCLWERRQRL 458
             + +  L  Y    F+  +LE   H T   + E A+ LG  R  L  + + L
Sbjct: 413 LASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465