Pairwise Alignments

Query, 338 a.a., Predicted SAM-dependent methyltransferases from Pseudomonas stutzeri RCH2

Subject, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 35/288 (12%)

Query: 28  DCYRLFHGSQEGAAGLTVDRYGPQLMVQSFHQPVDALSLESIRNAACEFLGE--PLQFVY 85
           D YR+ +   +    + +D+Y     +Q     + +  +++  +   E + E   ++ +Y
Sbjct: 93  DTYRMIYAEADYLPSIILDKYNKIASIQ-----ISSKIMDNYSDLIFECISEITDVETMY 147

Query: 86  NDRSQSNSRIDRSATGHQPDDAALEDQVGHEWGLRYRVRARHSGQDPLLFLDLRNARGWV 145
               +  S +     G    D +  + V  E   ++ V  +  G     FLD R+ R  +
Sbjct: 148 VQSGKKGSDVKTKIFG----DKSQIETVISEGNAKFNVNMK--GHKTGFFLDQRDNRIDL 201

Query: 146 KQH-SAGKSVLNLFSYTCGVGLCAAAGGAAEIWNVDFAERNLAVGRENGELNPSLPPMHF 204
           + +   G  VL++ SYT G  + A   G  E+  VD +E+ LAV  EN ELN  +   + 
Sbjct: 202 ENYVKPGDKVLDICSYTGGFAVHAGIKGG-EVTAVDLSEKALAVAEENMELN-RVKNYNC 259

Query: 205 VHSDYFPAIRQLAGLPVSARRGRTLPAYPRLAQRQFDLVLLDPPAWARSAFGTVDLLRDY 264
           + S+ F A++++                      +FD+V+LDPPA+  S+    + L  Y
Sbjct: 260 MVSNAFDAMKEMIK-----------------NNEKFDVVVLDPPAFTDSSKDIKNALNAY 302

Query: 265 QSLLKPALLATAEDGVLICCNNLAKVSMEDWRTQVLRCAEKAGRPVRE 312
            S+    L       +L+ C+    +  E ++  ++  + +A + +R+
Sbjct: 303 NSMNYLGLKLAKR--ILVTCSCSHHIDRESFKHTIVSSSLRAKKEIRQ 348