Pairwise Alignments

Query, 305 a.a., tRNA pseudouridine 55 synthase from Pseudomonas stutzeri RCH2

Subject, 298 a.a., Probable tRNA pseudouridine synthase B TruB (tRNA pseudouridine 55 synthase) (PSI55 synthase) (pseudouridylate synthase) (uracil hydrolyase) from Mycobacterium tuberculosis H37Rv

 Score =  167 bits (422), Expect = 4e-46
 Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 5/214 (2%)

Query: 13  GIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDA 72
           GI+++DKP G TS+  + + R +    + GH G+LDP+ATGVL +    ATK    L  A
Sbjct: 7   GIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAA 66

Query: 73  DKAYETVMQLGVTTTTADAEGEVLERKPVA-VTVEQLEALLPQFRGDILQVPPMYSALKR 131
            K+Y   ++LG TT+T DAEG+VL+  P   +T+E ++A + + RG+I QVP   SA+K 
Sbjct: 67  PKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKV 126

Query: 132 DGQPLYKLARAGEVVEREPRSVNIARLELLSLEGDKARL----AVSCSKGTYIRTLVEDL 187
            G+  Y+LAR G  V+ E R + I R ELL+       +     + CS GTYIR L  DL
Sbjct: 127 GGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDL 186

Query: 188 GHLLGCGAHVAELRRTQAGPFDLSQTVTLETLEQ 221
           G  LG G HV  LRRT+ G F+L Q  +L+ L +
Sbjct: 187 GDALGVGGHVTALRRTRVGRFELDQARSLDDLAE 220