Pairwise Alignments

Query, 382 a.a., carbamoyl-phosphate synthase, small subunit from Pseudomonas stutzeri RCH2

Subject, 387 a.a., carbamoyl-phosphate synthase small chain from Phaeobacter inhibens DSM 17395

 Score =  394 bits (1013), Expect = e-114
 Identities = 209/379 (55%), Positives = 259/379 (68%), Gaps = 9/379 (2%)

Query: 9   AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
           A LALADG+IF G   GA G+T+ E+ FNTAMTGYQEI+TDPSYA QIVT T+PH+GNTG
Sbjct: 11  ACLALADGTIFYGNGFGAYGETVAELCFNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNTG 70

Query: 69  TTPEDAESWKVWAAGLVIRDLPLISSNWRDKQPLPDYLKANGTVAIAGIDTRRLTRILRE 128
            TPED E+    AAG+V++  P ++SNWR  + L D+L     +AI GIDTRRLTR +R+
Sbjct: 71  VTPEDDETADPVAAGMVVKWDPTLASNWRATEELKDWLTRTNRIAIGGIDTRRLTRAIRQ 130

Query: 129 KGAQNGCILAGSDATE--EKALELARSFPGLKGMDLAKEVSVKERYEWRSSVWCLKDDGH 186
            GA +  +    D     E  +  AR + GL+G+DLAK+V+  + Y W    W   + G+
Sbjct: 131 LGAPHVALAHDPDGNFDIEALVAKAREWSGLEGLDLAKDVTCSQSYRWDEMRWAWPE-GY 189

Query: 187 AEIPASELPYH-VVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANG 245
                 E P H VVA DYG K NILR L + GC VTVLPA   A E LA +PDG+FL+NG
Sbjct: 190 TR---QEAPKHKVVAIDYGAKRNILRCLASAGCDVTVLPASATAEEVLAHSPDGVFLSNG 246

Query: 246 PGDPEPC-DYAIKAIQEVLET-DIPVFGICLGHQLLALASGAKTVKMPNGHHGANHPVQD 303
           PGDP    +YA+  IQ++L+T D+P+FGICLGHQ+LALA G KTVKM +GHHGANHPV++
Sbjct: 247 PGDPAATGEYAVPMIQQILDTTDLPMFGICLGHQMLALALGGKTVKMNHGHHGANHPVKE 306

Query: 304 LKTGVVMITSQNHGFAVDEASLPANVRATHKSLFDGTLQGIERTDKAAFSFQGHPEASPG 363
             TG V ITS NHGFAVD  SLP  V  TH SLFDG+  GI  +D+  +S Q HPEASPG
Sbjct: 307 NATGKVEITSMNHGFAVDGQSLPDGVEETHVSLFDGSNCGIRISDRPVYSVQHHPEASPG 366

Query: 364 PHDVAPLFDRFIETMAKRR 382
           P D   LF+RF E MA R+
Sbjct: 367 PQDSFYLFERFAEAMAARK 385