Pairwise Alignments

Query, 557 a.a., DNA repair protein RecN from Pseudomonas stutzeri RCH2

Subject, 554 a.a., recombination and repair protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  505 bits (1300), Expect = e-147
 Identities = 265/552 (48%), Positives = 360/552 (65%), Gaps = 1/552 (0%)

Query: 1   MLVHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLTLGDRADSSVVRIGAD 60
           ML  LS++N+AIV  L+L+ + GM+ I+GETGAGKSI +DALGL LG+RAD+  VR GA 
Sbjct: 1   MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGAS 60

Query: 61  KADILASFDLDDIPDARTWLAERDMDNDGPCILRRVITAEGRSRGYINGTPCPQGDLKAL 120
           K ++ A F LDD+P AR WL + D++ D  CILRR IT++GRSR YING P P   LK+L
Sbjct: 61  KTEVSARFSLDDVPLARRWLEDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSL 120

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEFSGSQELARQVQLAAQRWRQTRQTLERLSNSG 180
           G+ L+ IH QH H +LLK +    LLD ++  + L   V  A QR RQ    L +L  S 
Sbjct: 121 GQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVASAYQRCRQIEAELRQLEQSQ 180

Query: 181 DEQRARHQLLSYQLEELENLALGENELEQLEQEHRNLANAEQLLGACRQVMELCSESDAG 240
            E+ AR QLL YQ+EEL+  AL E E EQ+E EH+ LAN   L+  C+  + L SESD G
Sbjct: 181 QERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG 240

Query: 241 NVLSALTSSLQRLTAFQNQPKSLSEAVNLLASAQIQVEEAIGELNRFVDHFDADPERQQT 300
           N+ S L  +L      ++   +L+   N+L  A IQV+E+  EL R++ + + DPE    
Sbjct: 241 NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAY 300

Query: 301 LEERLDTIYTLARKHRVQPSELPSLHQQLLEELEGLNADDEAVERLGEELAAYARHYEEK 360
           LEERL    TLARKH V   +L + HQ+L  EL GL++D+  ++ L +++      Y   
Sbjct: 301 LEERLSKAMTLARKHHVAADKLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSH 360

Query: 361 ASELSRMRQAAADQLASAAEVEIQRLGMPGGRFSVQLKPAVEGELMPYGFEQVEFLVSAN 420
           A +LS+ R   A +L       IQ L MP G+F++++    +  +   G + VEFLV+ N
Sbjct: 361 AQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVN-FNDKVMSANGSDSVEFLVTTN 419

Query: 421 PGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR 480
           PGQPL PLAKVASGGELSRI L IQVITA+    PTL+FDEVDVGI GPTA +VG++LR 
Sbjct: 420 PGQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRA 479

Query: 481 LGERGQVLTVTHLPQVAAQGHHHLFVHKARGADETRTAVAELDQNGRVEEIARMLGGVDL 540
           LGE  QV  VTHLPQVA  GH H+FV+K+    +T T++  LD++ R++E+AR+LGG  +
Sbjct: 480 LGEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTI 539

Query: 541 TEQSLAHARQMV 552
           TE +LA+AR+++
Sbjct: 540 TENTLANARELL 551



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 32/224 (14%)

Query: 350 LAAYARH---YEEKASELSRMRQAAAD--QLASAAEVEIQRLGMPGGRFSVQLKPAVEGE 404
           L +YA H    E  AS   R RQ  A+  QL  + +  I R  +       Q++   E  
Sbjct: 146 LDSYANHRMLQESVASAYQRCRQIEAELRQLEQSQQERIARKQL----LQYQVEELDEFA 201

Query: 405 LMPYGFEQVEF---------LVSANPGQPLRPLAKVASGGELSRISLAIQVITAQTSRVP 455
           LM   FEQ+E           +  +    L  L++   G   S ++ A+ +     S  P
Sbjct: 202 LMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEGNIESLLNRALSLAATLESLDP 261

Query: 456 TLVFDEVDVGIGGPTAEIVGQLLRRLGERGQVLTVTHLPQVAAQGHHHLFVHKARGADET 515
           TL        IG    + + Q+     E G+ L+   L        H  ++ +      T
Sbjct: 262 TLA------PIGNMLNDALIQVQESSSELGRYLSNLELDP-----EHFAYLEERLSKAMT 310

Query: 516 ---RTAVAELDQNGRVEEIARMLGGVDLTEQSLAHARQMVTSAQ 556
              +  VA        +E+AR L G+D  E  L   +Q V +++
Sbjct: 311 LARKHHVAADKLAAHHQELARELAGLDSDEAQLDELKQQVQTSR 354