Pairwise Alignments

Query, 557 a.a., DNA repair protein RecN from Pseudomonas stutzeri RCH2

Subject, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

 Score =  490 bits (1262), Expect = e-143
 Identities = 258/554 (46%), Positives = 361/554 (65%), Gaps = 5/554 (0%)

Query: 1   MLVHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLTLGDRADSSVVRIGAD 60
           ML  LS++N+AIV  L+L+ K GM+ I+GETGAGKSI +DALGL LG+RAD++ VR GA 
Sbjct: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60

Query: 61  KADILASFDLDDIPDARTWLAERDMDNDGPCILRRVITAEGRSRGYINGTPCPQGDLKAL 120
           KA++ A F L+DIP A+ WL + D++ D  CILRR I ++GRSR YING P P   ++AL
Sbjct: 61  KAEVSARFALNDIPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLNQMRAL 120

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEFSGSQELARQVQLAAQRWRQTRQTLERLSNSG 180
           G+ LI IH QH H ++LK++    LLD ++  + L      + QR++  ++ L +L  S 
Sbjct: 121 GQQLIGIHGQHAHHAMLKSEHQLTLLDSYANHKMLLEACSASYQRFKLIQKELSQLQQSQ 180

Query: 181 DEQRARHQLLSYQLEELENLALGENELEQLEQEHRNLANAEQLLGACRQVMELCSESDAG 240
            E+ AR QLL YQ+EEL+  ALGE E +++E EH+ LAN   L+ AC++ + L  +++ G
Sbjct: 181 HERIARKQLLQYQVEELDEFALGEEEFDEIEAEHKKLANGTALIQACQRTLYLLQDNEEG 240

Query: 241 NVLSALTSSLQRLTAFQNQPKSLSEAVNLLASAQIQVEEAIGELNRFVDHFDADPERQQT 300
            + S L  SL +    +     L    N+L  A IQV+E+  EL R++D  + DPE    
Sbjct: 241 AIESLLNMSLDQAQELEGYDPELKGVGNMLNDALIQVQESSSELQRYLDKLELDPEHFAA 300

Query: 301 LEERLDTIYTLARKHRVQPSELPSLHQQLLEELEGLNADDEAVERLGEELAAYARHYEEK 360
           LE+RL  I  LARKH V   +L   HQ L +EL  L++D+E ++ + ++L +    +   
Sbjct: 301 LEQRLSKIMMLARKHHVNAKDLYQHHQALSQELSELDSDEEKLDEIAQQLESCRESFIAH 360

Query: 361 ASELSRMRQAAADQLASAAEVEIQRLGMPGGRF--SVQLKPAVEGELMPYGFEQVEFLVS 418
           A +LS+ RQ  A +L       I  L MP G+F   VQ  P +   + P G + VEF V+
Sbjct: 361 AQKLSQSRQRYAKELDKQVTRSIHELSMPKGKFIIDVQFNPEM---MSPNGCDTVEFQVT 417

Query: 419 ANPGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLL 478
            NPGQPL+P+AKVASGGELSRI L IQVITA+    PTL+FDEVDVGI GPTA +VG++L
Sbjct: 418 TNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGKML 477

Query: 479 RRLGERGQVLTVTHLPQVAAQGHHHLFVHKARGADETRTAVAELDQNGRVEEIARMLGGV 538
           R LGE  QVL VTHLPQVA  GH H+FV+K   A +T T++  LD+  R+EE+AR+LGG 
Sbjct: 478 RALGESTQVLCVTHLPQVAGNGHQHMFVNKQSKAGQTETSMVPLDKGQRIEELARLLGGD 537

Query: 539 DLTEQSLAHARQMV 552
            +T  +LA+A++++
Sbjct: 538 VITNNTLANAKELL 551