Pairwise Alignments

Query, 557 a.a., DNA repair protein RecN from Pseudomonas stutzeri RCH2

Subject, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

 Score = 42.4 bits (98), Expect = 1e-07
 Identities = 22/84 (26%), Positives = 40/84 (47%)

Query: 416  LVSANPGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVG 475
            L+ A+P         V SGGE S  +LA        +  P  V DEVD  +    A ++G
Sbjct: 1085 LIDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIG 1144

Query: 476  QLLRRLGERGQVLTVTHLPQVAAQ 499
            ++++   +  Q + ++H  Q+ ++
Sbjct: 1145 EMIKNASKDSQFIVISHREQMISK 1168



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 54/294 (18%), Positives = 115/294 (39%), Gaps = 38/294 (12%)

Query: 117 LKALGELLIDIHSQHEHQSLLKTDTHRRLLDEFSGSQELARQVQLAAQRWRQTRQTLERL 176
           ++ L + L +I S+HE    L    ++ L D     +   ++V    +  ++ +  L++ 
Sbjct: 449 IETLQKELEEIRSEHEDTKSL----YKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKS 504

Query: 177 SNSGDEQRARHQLLSYQLEELENLALGENELEQLEQEHRNLANAEQLLGACRQVMELCSE 236
                ++ A+ + +    +++E+ +L       LE +   + +    LG      +   E
Sbjct: 505 HADYIKENAKIKAM----KDMEDFSLDRAVKSVLEAKLPGVVDIAGNLGKTDAEYKTAIE 560

Query: 237 SDAGNVLSALTSSLQRLT----AFQNQPKSLSEAVNLLASAQIQVEEAI-----GELNRF 287
           +  GN L+ +   ++R+     A Q   K+       L   +I   EA+     G + R 
Sbjct: 561 NAGGNRLNYIV--VKRMDDGARAIQYLKKNNLGRTTFLPLDRINGPEALYLDDEGVVGRA 618

Query: 288 VDHFDADPERQQTLE---------ERLDTIYTLARKHR----------VQPSELPSLHQQ 328
           +D  +  PE +             E LD   TL++ HR          ++PS      + 
Sbjct: 619 IDLVEFKPEHENLFRYVFGNTIIVENLDYAKTLSKDHRARFVTLEGEVIEPSGAMIGGRS 678

Query: 329 LLEELEGLNADDEAVERLGEELAAYARHYEEKASELSRMRQAAADQLASAAEVE 382
             + +  ++ D   +E+L E+++       E   E+ R++   A       E+E
Sbjct: 679 RKKSVIKVDIDTSKLEKLAEDISELDGTLSETKDEIERLQNKNATYSTRKMELE 732