Pairwise Alignments

Query, 259 a.a., ABC-type proline/glycine betaine transport systems, periplasmic components from Pseudomonas stutzeri RCH2

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 6/240 (2%)

Query: 21  LVQRVLERHDYEVQVSAAPHEDMFRRYGAGAVDMLASAWLPASHGDYLAPYAAQTRTLGV 80
           +V+ +LE   Y V+++       + +   G +D+  + WLP +H +Y   Y  Q   + V
Sbjct: 52  VVKVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTHEEYWTQYGNQLEMVHV 111

Query: 81  LYRPYCI-WGVPDYVPVDAVQSVADLLRPEVATRMTRLIQGINPGAGISRFSRAIVQQYG 139
                 +   VP Y     +QS+ DL   E        I GI PGAGI   +   +  Y 
Sbjct: 112 NVGKTALGLAVPTYTYEAGIQSITDLNGNE--ELFDGKIIGIEPGAGIMSNTEKAIDSYS 169

Query: 140 LDRLGYHFENGTQADCFVRYEQAHARREWCVVPLWHPQFLHHSHRIRPLDEPLGLLGGQD 199
           L   GY  ++ +         +A    E  VV +W P  +     I+ LD+P  + G  D
Sbjct: 170 LS--GYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFKFDIKMLDDPEKVYGDGD 227

Query: 200 DATLIVSEPFARDMPAALLEELNRLSPGNEVISELDHSICRDGMSALQAADAWLARSVAL 259
               I    F  D P  + E   +      V SE  +    +GM   + A+ W+A +  L
Sbjct: 228 KVYTIARTDFKDDYP-EVYEFFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVANNPEL 286