Pairwise Alignments

Query, 318 a.a., Permeases of the drug/metabolite transporter (DMT) superfamily from Pseudomonas stutzeri RCH2

Subject, 315 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 22/304 (7%)

Query: 29  MVLLLLAILVWGANWPVMKAGLGHVTPVWFSASRFALGALCLFLLQLLTGT-LYRPSRGD 87
           ++   L  +VWG+ +  +   L   +P    A RF    L L  +  L G  +++ S   
Sbjct: 15  IIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGICYLRGEQIFKKSL-- 72

Query: 88  VPLLLSVGLLQMLAFTLLGALAMTDIPAGRSAVLAYTTPLWVTPLAVLVFRERLV-PRQL 146
           V      G++ +     +  LA   + +   A++A +T LW+  L V ++R     P  +
Sbjct: 73  VKRSAVSGIVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVPMWRTNFRNPLTI 132

Query: 147 LGAALGMFGVAVLF-NPLTLDWNNASLVRANLMLLIASACWALCILHLRYAKVR---ATA 202
            G  +G  GV +L+   L  +W +    R  L+L+     WAL  L+ +Y   R     A
Sbjct: 133 AGGGIGFGGVVMLYAEQLNAEWLHPQSERGILLLVFGCISWALGTLYAKYRSSREEEVNA 192

Query: 203 YQLAPWQMLVATVPLLALARIVEGPF----TGDGSVAFWQIILFVGPLATAFCFCAVNAA 258
           +  + WQML A+V +  +  +V G          SV  W  +L++    +   +    +A
Sbjct: 193 FAGSAWQMLFASV-MFWICAVVNGDVREADLSTVSVTSWFSLLYLISFGSLLAY----SA 247

Query: 259 SMWL----PATSMSLAMLGVPLVGLMSSVFWLGETLSASLIAGVLAISAGVLLAIVKTRA 314
            +WL    PA  +       P + ++  V +  E ++   ++G+L I  GV+L I + R 
Sbjct: 248 YVWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVML-ISRKRN 306

Query: 315 KATS 318
           K  S
Sbjct: 307 KMKS 310