Pairwise Alignments

Query, 739 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

Subject, 828 a.a., FIG003033: Helicase domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (305), Expect = 1e-31
 Identities = 117/386 (30%), Positives = 176/386 (45%), Gaps = 59/386 (15%)

Query: 21  QRWIWTEGWTSLRDAQERAIPALLGADQDVIIAAATAAGKTEAAFLPILTNLLQDTE--- 77
           ++W    GW       ++ + A +   +  ++ A+T AGKT A +L  L    +      
Sbjct: 9   KQWFDARGWKPF--VFQKQVWAAVKRGESGLLHASTGAGKTYAVWLAALNRFARPAPPLD 66

Query: 78  ---------KPGAVLYISPLKALINDQWDRLARLCDELELP--VIAWHGDISASRKHRFL 126
                    +P  VL+I+P++AL  D    L     +L LP  V    GD SA+ + R  
Sbjct: 67  KPRKRKPPAEPLTVLWITPMRALAADTGKALEAPLADLHLPWSVGLRTGDTSANERARQG 126

Query: 127 KSPEGILLITPESLEALFVNKGTSLAGLFANLRYLVVDELHAFIGSERGKQLQSLMHRV- 185
           +     L+ TPESL  +        A   + LR +VVDE H  +G++RG QLQ  + R+ 
Sbjct: 127 RRLPTALITTPESLTLILARADAHTA--VSTLRMVVVDEWHELLGNKRGVQLQLALARLR 184

Query: 186 ----ETIIDRPLPRVGLSATLGDMTLAAAFLRPNAPHHVSVIESKGSGQILKAQIRGYVE 241
               E I+       G+SATLG+   A   L P   + +SV  + G    +   +   +E
Sbjct: 185 HWHPELIV------WGVSATLGNQAHAGQVLIPQG-NGISVQGADGKALRVDTLLPPTLE 237

Query: 242 --------SKKALPVQPEGDDVFSPDHAIAEHLFQVLRGSNNLIFPNSRTQVE-WFADNL 292
                     K LP              +AE    +    + L+F N+R Q E W+   L
Sbjct: 238 RFPWAGHIGLKMLP------------RVVAE----IDASRSCLVFTNTRAQSEIWYQALL 281

Query: 293 RRRCEQNGVPNEFWPHHGSLAKDIREETEKALKAGDRPATAVCTTTLELGVDIGSIKTVV 352
             R +  G+      HH SL++D R+  E+ALK G   A  VCT++L+LGVD   ++ V+
Sbjct: 282 ETRPDWAGL---IALHHSSLSRDTRDWVEQALKDGQLKAV-VCTSSLDLGVDFLPVERVL 337

Query: 353 QIGAPPSVASLRQRLGRSGRRPGEAA 378
           QIG+   VA L QR GRSG  PG  +
Sbjct: 338 QIGSAKGVARLMQRAGRSGHAPGRTS 363