Pairwise Alignments

Query, 739 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

Subject, 1513 a.a., Probable ATP-dependent helicase Lhr (large helicase-related protein) from Mycobacterium tuberculosis H37Rv

 Score =  133 bits (334), Expect = 8e-35
 Identities = 139/490 (28%), Positives = 216/490 (44%), Gaps = 79/490 (16%)

Query: 35  AQERAIPALLGADQDVIIAAATAAGKTEAAFLPILTNLLQD---TEKPGA--VLYISPLK 89
           AQ  A  A+   D  ++IA  T +GKT AAFL  L +L      +E+P A  VLY+SPLK
Sbjct: 30  AQASAWAAIADGDNTLVIAP-TGSGKTLAAFLWALDSLAGSEPMSERPAATRVLYVSPLK 88

Query: 90  ALINDQWDRL-------ARLCDELELP-----VIAWHGDISASRKHRFLKSPEGILLITP 137
           AL  D    L        RL +   LP     V    GD   + + + +  P  +L+ TP
Sbjct: 89  ALAVDVERNLRTPLAGLTRLAERQGLPAPQIRVGVRSGDTPPALRRQLVSQPPDVLITTP 148

Query: 138 ESLEALFVNKGTSLAGLFANLRYLVVDELHAFIGSERGKQLQSLMHRVETIIDRP-LPRV 196
           ESL   F+   ++       ++ +++DE+HA   ++RG  L   + R++ +  R    R+
Sbjct: 149 ESL---FLMLTSAARQTLTGVQTVIIDEIHAIAATKRGAHLALSLERLDDLSSRRRAQRI 205

Query: 197 GLSATLGDMTLAAAFLRPNAPHHVSVIESKGSGQILKAQIRGYVESKKALPVQPEGDDVF 256
           GLSAT+      A FL   +P   + I +  + + ++  ++  V     L      D+  
Sbjct: 206 GLSATVRPPEELARFLSGQSP---TTIVAPPAAKTVELSVQVPVPDMANLT-----DNTI 257

Query: 257 SPDHAIAEHLFQVLRGSNN-LIFPNSRTQVEWFADNLRR----RCE-----------QNG 300
            PD  +   L  ++   N+ ++F NSR   E     L      RC              G
Sbjct: 258 WPD--VEARLVDLIESHNSTIVFANSRRLAERLTARLNEIHAARCGIELAPDTNQQVAGG 315

Query: 301 VPNEFW--------------PHHGSLAKDIREETEKALKAGDRPATAVCTTTLELGVDIG 346
            P                   HHGS++K+ R   E+ LK G   A  V T++LELG+D+G
Sbjct: 316 APAHIMGSGQTFGAPPVLARAHHGSISKEQRAVVEEDLKRGQLKAV-VATSSLELGIDMG 374

Query: 347 SIKTVVQIGAPPSVASLRQRLGRSGRRPGEAAILRSYCKERQLDDGSPLSDRLRQGLLQS 406
           ++  V+Q+ APPSVAS  QR+GR+G + GE +                L  + R  LL  
Sbjct: 375 AVDLVIQVQAPPSVASGLQRIGRAGHQVGEIS-------------RGVLFPKHRTDLLGC 421

Query: 407 IAMIRLLMQGWFEPPRVHGLHLSTLVQQCLSVIAQRGGATAAELW-STLIRSGPFTGVEQ 465
              ++ ++ G  E  RV    L  L Q  ++  A       A+ W  T+ R+ PF  + +
Sbjct: 422 AVSVQRMLAGEIETMRVPANPLDILAQHTVAAAALE--PLDADAWFDTVRRAAPFATLPR 479

Query: 466 GSFLSLLRAL 475
             F + L  L
Sbjct: 480 SLFEATLDLL 489