Pairwise Alignments

Query, 521 a.a., maltose ABC transporter, permease component 1 (MalF) (from data) from Pseudomonas stutzeri RCH2

Subject, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 22/243 (9%)

Query: 267 FTGFANFSRVLTEPSIREPFMQIFAWTFAFAGLTVVFTLAVGLVLASLLQWELVRGKAFY 326
           F G  N+ R+  +P     F +    T  +A + V      GL LA L+Q    R  A  
Sbjct: 67  FVGARNYLRMWNDPL----FWKGARVTALYAAMLVPLLYVCGLGLALLVQ-RTDRFNAIM 121

Query: 327 RLMLILPYAVPGFISILVFRGLFNQNFGEINLLLEGLFGIRPDWFSDPSLARTMILIVNT 386
           R M   P+ V   +  LV++ +     G ++ L   L         DP+ A   I++V+ 
Sbjct: 122 RSMFFAPHMVSLVVVALVWQFMVVDKIGVVSRLTAALDIGGISLLGDPNFALITIVLVSV 181

Query: 387 WLGYPYMLLLCMGLLQAIPRDQYEASAIDGASPLDNLLRITLPQLIKP-----LMPLLIA 441
           W    + +L+ +G LQ IPR  YEA+ IDGA  +     ITLP L+KP     +M  ++A
Sbjct: 182 WFLMGFYMLIFLGGLQDIPRQYYEAAMIDGAGAIARFWFITLP-LLKPTSFFVIMVSMVA 240

Query: 442 CFAFNFNNFVLITLLTRGGPDIIGATTPAGTTDLLVSYTYRIAFQDSGQDFALAAAIATM 501
             A     F +I ++T+GG        PA  T +L+ Y Y+ AF      F  AAA+A++
Sbjct: 241 AVA-GAQAFDIIYVMTKGG--------PANATSVLIVYIYQQAFGFGA--FGYAAAMASI 289

Query: 502 IFI 504
           + +
Sbjct: 290 LVV 292



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 40  SLYLVVALYVQKQMAFALLGLVVTGIASYLFINRRMYAQRYIFP------SVAGMLVFVI 93
           +L L + L V   ++  L    V G   Y F+  R Y + +  P       V  +   ++
Sbjct: 37  ALGLFIFLGVPMALSLVLSVFEVNGFGGYSFVGARNYLRMWNDPLFWKGARVTALYAAML 96

Query: 94  FPLLYTVGIG 103
            PLLY  G+G
Sbjct: 97  VPLLYVCGLG 106