Pairwise Alignments

Query, 317 a.a., alpha-ketoglutarate TRAP transporter, solute receptor component (from data) from Pseudomonas stutzeri RCH2

Subject, 328 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  170 bits (431), Expect = 4e-47
 Identities = 106/323 (32%), Positives = 166/323 (51%), Gaps = 7/323 (2%)

Query: 1   MRLTKRLGLLAAAAAFTASTAAVAAPTFINILTGGTSGVYYPIGVALSQQYNKI---DGA 57
           M L K + + A AAA   S  A +A  FI I TG  +GVYYP G A+ +  NK       
Sbjct: 7   MSLPKIIKMGAIAAAVIGSGVA-SAQDFITIGTGSVTGVYYPTGGAICKLVNKDRKDHNI 65

Query: 58  KTSVQATKASVENLNLLQAGRGELAFSLGDSVEDAWNGVEDAGFKAPLKRLRAIAGTYNN 117
           + SV++T  S+ N+N +++G  +      D     +NG  +   + P K+LRA+   +  
Sbjct: 66  RCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSEFAEQGPYKKLRAVFSMHTE 125

Query: 118 YIQIVASAESGIKTLDDLKGKRISVGAPKSGTELNARAIFKAAGLDYKDMGRVEFLPYAE 177
              I+A A+SGI+ + DL GKR+++G P SG     + +  A G +         L  +E
Sbjct: 126 PFNIIARADSGIENVKDLAGKRVNIGNPGSGDRATMQVVMDAFGWNNDSFKLAAELKGSE 185

Query: 178 SVELIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAEVVEKI--ESDAYLAGVIPA 235
             + + + ++DA +   G    AI++  ++     V      +EKI   +  Y   V+PA
Sbjct: 186 RSQALCDNKIDAFIYMVGHPNGAIKEATTSCAAKLVPATGPEIEKIVANNPYYAYSVVPA 245

Query: 236 GTYDGQDADVPTVAITNILVTHEKVSDEVAYQMTKLMFDNLAALGNAHSAAKDIKLEN-A 294
           G Y G D +V +  +   LVT E+VS+ V Y +TK +F+N       H A  ++K E+  
Sbjct: 246 GMYSGTDQEVKSFGVAATLVTTEEVSEAVVYNLTKAVFENFDTFTRLHPAFANLKKEDMV 305

Query: 295 TKNLPIPLHPGAERFYKEAGVLK 317
           T    IPLHPGA ++YKEAG++K
Sbjct: 306 TAGNSIPLHPGAVKYYKEAGLIK 328