Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 542/675 (80%), Positives = 603/675 (89%), Gaps = 1/675 (0%)

Query: 1   MSESQ-GLHASPSEWPRALFYVALLFSIYQIVTAAFHPVSSQVLRAGHVGFLLLLVFLCY 59
           MSE Q G+   P +WP+ LFYVALLFSI+QIVTAAF PVSS VLRA HVGFLL +VFL Y
Sbjct: 1   MSEDQHGIATDPRDWPKTLFYVALLFSIFQIVTAAFSPVSSIVLRAVHVGFLLWVVFLSY 60

Query: 60  PARGNGKPFQPVAWLLGLAGFATFFYQWYFEADLIQRSGDMTTADMVVGLTLIVLVFEAA 119
           PA G  +P+QP+AW+L L G AT  YQW FE+DLIQRSGD+TT DM++G+ L+VLVFEAA
Sbjct: 61  PAHGRQRPWQPLAWVLSLGGVATALYQWVFESDLIQRSGDLTTTDMIMGIVLVVLVFEAA 120

Query: 120 RRVMGIALPIICALFLAYGLLGEYLPGDLAHRGYYLDQIVNQLSFGTEGLYGTPTYVSAT 179
           RRVMGIALPIIC LFLAYGL GEYLPGDLAHRGY LDQI+NQLSFGTEGLYGTPTYVSAT
Sbjct: 121 RRVMGIALPIICGLFLAYGLFGEYLPGDLAHRGYGLDQIINQLSFGTEGLYGTPTYVSAT 180

Query: 180 YIFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVT 239
           YIFLFILFG+FLE+AGMIKLFTDFAMGLFGHKLGGPAKV+VVSSALMGTITGSG+ANVVT
Sbjct: 181 YIFLFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVT 240

Query: 240 TGQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAAL 299
           TGQFTIPLMKRFGY+ AFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAAL
Sbjct: 241 TGQFTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAAL 300

Query: 300 IPALLYFGSVFWMVHLEAKRAGLKGLPKDECPSAMAAVKERWYLLIPLVVLVWLLFSGRT 359
           IPA LYFGSVFWMVHLEAKR+ LKGLPKD+CPSA  AVK+ W+LLIPL VLV+LLFSGRT
Sbjct: 301 IPACLYFGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYLLFSGRT 360

Query: 360 PMFAGTIGLALTAIVILGSAIILKVSNFALRIAFWIALGLLCAGFFQLGIGVIFGVIAAL 419
           P+F+G +GLALTAIVILGSAIILKVSN+ALR AFWIALGLLC GFF+LGIGV+F VI  L
Sbjct: 361 PLFSGMVGLALTAIVILGSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVIGVL 420

Query: 420 VAVCWFIKGGRDTLVICLHALVEGARHAVPVGIACALVGVIIGVVSLTGVASTFAGYILA 479
           V  CWF++G R+TLVICLHALV+GARHAVPVGIACALVG II VVSLTGVASTFAGYILA
Sbjct: 421 VVACWFMQGTRETLVICLHALVDGARHAVPVGIACALVGSIIAVVSLTGVASTFAGYILA 480

Query: 480 VGENNLFLSLLLTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPLIVSHMFVFYFGI 539
           +G +NL LSL+LTMLTCLVLGMGIPTIPNYIITSSIAAPALL+LGVPLIVSHMFVFYFGI
Sbjct: 481 IGRDNLLLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGI 540

Query: 540 MADLTPPVALACFAAAPIAKERGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGAT 599
           +ADLTPPVALACFAAAPIA+E GLKIS WA+RIA+AGF++PFM VYNPALM+QG +   T
Sbjct: 541 LADLTPPVALACFAAAPIARESGLKISFWAVRIALAGFVIPFMTVYNPALMLQGDNLWMT 600

Query: 600 LYMLFKAAFAVGLWGAVFTGYLQRPMALWEKVLAFAAAASMVLAMPISDEIGFALGALFL 659
            YML K   AVGLWG   TGYLQ+ M +WE++L FAA A +V+A+P++DEIGF LG L +
Sbjct: 601 AYMLIKTLLAVGLWGMASTGYLQQKMPIWERLLCFAAGALLVVALPVTDEIGFVLGGLLI 660

Query: 660 IQHIWRARRAEPATA 674
           +QH+WRARR+  A A
Sbjct: 661 LQHVWRARRSGRALA 675