Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  250 bits (638), Expect = 2e-70
 Identities = 199/694 (28%), Positives = 328/694 (47%), Gaps = 61/694 (8%)

Query: 16  RALFYVALLFSIYQIVTAAFHPVSSQVLRAGHVGFLLLLVFLCYPA----RGNGKPFQPV 71
           R +  + +L S+  I        S   + A H     ++  L YPA    RG+ K     
Sbjct: 25  RTISVLCVLLSLAHIWFNTLSTWSELWISAIHFAGFAMICALWYPALPRWRGS-KVALAF 83

Query: 72  AWLLGLAGFATFFYQWYFEADLIQRSGDMTTADMVVGLTLIVLVFEAARRVMGIALPIIC 131
             LL L   A   Y    E  L +R     T+D V  +  I++V E  RR MG  +P + 
Sbjct: 84  DVLLALLALACLIYLMLAEDALYERGVKFVTSDWVFSILAILIVMEMIRRTMGWFIPTLI 143

Query: 132 ALFLAY-GLLGEYLPGDLAHRGYYLDQIVNQLSFGTEGLYGTPTYVSATYIFLFILFGSF 190
            + L Y  + G++  G     G   + ++ +  + +EG++G+   +S +++F+FILFG+F
Sbjct: 144 LICLTYVSVWGKWAGGIFHFPGLSAETLLYRSFYSSEGMFGSIAAISWSFVFMFILFGAF 203

Query: 191 LEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTTGQFTIPLMKR 250
           L ++G+     D +    G  +GGP  ++V++S LMG+++GS VAN V+TG  TIP+MK+
Sbjct: 204 LVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVITIPMMKK 263

Query: 251 FGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPALLYFGSVF 310
            G+   FA GVEA +S G Q+MPPVMGA AFIMA    +P+V+I   + IPAL+YF SV 
Sbjct: 264 AGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPALIYFLSVA 323

Query: 311 WMVHLEAKRAGLKGLPKDECPSAMAAVKERWYLLIPLVVLVWLLFSGRTPMFAGTIGLAL 370
           + V +EAKR G++ +   + P  M  +   W+ LIPL VLV LL  G TP +A   GL++
Sbjct: 324 FFVRIEAKRMGVQIVTTSQEP-FMKVLLSGWHNLIPLAVLVTLLVVGFTPTYAA--GLSI 380

Query: 371 TAIVI---------LGSAIILK-----VSNFALRIAFWIALGLLCAGFFQLGIGVIFGVI 416
            ++++         +G   I++       N A      + +GL+       GIG  F ++
Sbjct: 381 LSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVISTTGIGNTFSLM 440

Query: 417 AALVAVCWFIKGGRDTLVICLHALVEGARHAVPVGIACALVGVIIGVVSLTGVASTFAG- 475
                    I    +  ++ +  L+  A   + +G+      +++G +S   +    A  
Sbjct: 441 ---------INNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAES 491

Query: 476 ------------------YILAVGENNLFLSLLLTMLTCLVLGMGIPTIP-NYIITSSIA 516
                             ++LA  +    LSLL   +        I  +P +++ T    
Sbjct: 492 QLVDLMVSGQLPEQAKAIFMLAAPDQ---LSLLNAPMAAEKAHELISLVPADFVETLLQQ 548

Query: 517 APALLDLGVPLIVSHMFVFYFGIMADLTPPVALACFAAAPIAKERGLKISMWAIRIAIAG 576
           +  L  +G+ L+ +H+ +F+    +++TPPV L  FAAA IAK   ++    A +IA   
Sbjct: 549 SLGLEAIGLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGFTAWKIAKGL 608

Query: 577 FIVPFMAVYNPALMMQGGDWGATLYMLFKAAFAVGLWGAVFTGYLQ-RPMALWEKVLAFA 635
           ++VP +  Y   +     D    + +   A F          GYL+ R   LW  +LA  
Sbjct: 609 YLVPVLIAYTQLI---SWDVATVVTIGIFAIFGTYAMIGAIEGYLEGRLNLLWRLLLAVI 665

Query: 636 AAASMVLAMPISDEIGFALGALFLIQHIWRARRA 669
               +  ++PI   I     ALF+   I+  + A
Sbjct: 666 GVLLVWPSLPI--WIRLVCVALFIAIFIYSGKTA 697