Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 94/418 (22%), Positives = 167/418 (39%), Gaps = 44/418 (10%)

Query: 184 FILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTTGQF 243
           FIL  +F+   G+ K    FA+ + G   GG A  SVV+  +   ++GS  A VV  G  
Sbjct: 63  FILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSI 122

Query: 244 TIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPAL 303
            I  M + GY   FA GV   +     ++PP +  V +  A  ++V    +    ++P L
Sbjct: 123 VIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVG--RMFLGGVVPGL 180

Query: 304 LYFGSVFWMVHLEAKRAGLKGLPKDECPSAMAAVKERWYLLIPLVVLVWLLFSGRTPMFA 363
           L    +   +++ A+   L   P      A+ A KE  + L+ +V+++  ++ G   +F 
Sbjct: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGG---IFT 237

Query: 364 GTIGLALTAI--VILGSAIILKVSNFALRIAFWIALGLLCAGFFQLGIGVIFGVIAALVA 421
            T   A+ A+    + + I   +  FA +      L  +   F              L  
Sbjct: 238 PTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTI 297

Query: 422 VCWFIKGGRDTLVICLHALVEGARHAVPVGIACALVGVIIGVVSLTGVASTFAGYILAVG 481
           +  FI       +I  H L E     +P  I  +++   +G ++                
Sbjct: 298 MLMFIIA---NALILKHVLTE---ERIPQMITESMLSAGLGPITF--------------- 336

Query: 482 ENNLFLSLLLTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGV-PLIVSHMFVFYFGIM 540
                  L++  L  LV G  +      +I + +  P  + LG+ P+ +  M V    I 
Sbjct: 337 -------LIVVNLILLVGGQFMEPSGLLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEI- 388

Query: 541 ADLTPPVALACFAAAPIAKERGLKISMWAIRIAIAGFI-------VPFMAVYNPALMM 591
             +TPPV L  F  + +AK   + +   A+      F+       VP+++ + P L+M
Sbjct: 389 GMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFLIIVTYVPWVSTWLPTLLM 446