Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 62.8 bits (151), Expect = 3e-14
 Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 9/206 (4%)

Query: 183 LFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTTGQ 242
           LF+  G  L++  + +   +    LFG   GG A  +V+   L+   TG   A+VV  G 
Sbjct: 62  LFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGL 121

Query: 243 FTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPA 302
            ++P+M ++ Y    A G    S    QI+PP    V  ++ + + VP  ++ +AAL P 
Sbjct: 122 ISLPVMLKYRYDKGLACGTICASGTLGQIIPP--SIVLILLGDVLGVPVGDLFQAALWPG 179

Query: 303 LLYFGSVFWMVHLEAK---RAGLKGLPKDECPSAMAAVKERWYLLIPLVVLVWLLFSGRT 359
           L+   +    + + AK   +A +   P  +       VK    ++ PL ++V +L S   
Sbjct: 180 LMLVAAYIIYILIYAKLNPQAAMPIEPDADLSRRQEVVKALKAVIPPLALIVVVLGS--- 236

Query: 360 PMFAGTIGLALTAIVILGSAIILKVS 385
            +FAG      +A +    AI+L ++
Sbjct: 237 -IFAGVATPTESAALGGAGAILLALA 261