Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score = 72.0 bits (175), Expect = 5e-17
 Identities = 94/421 (22%), Positives = 176/421 (41%), Gaps = 68/421 (16%)

Query: 176 VSATYIFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVA 235
           VS   + LF+L G  +  +G+ +     A  L GH  G  A++  V   L+G +T S  A
Sbjct: 58  VSLLALPLFVLAGCIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANA 117

Query: 236 NVVTTGQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAF-IMAETINVPFVEI 294
           +     +     M + GY  AFA  + +++++ + ++PP +G + +  +AET       +
Sbjct: 118 DAAMLAKTLGVEMSQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAET---SIGRL 174

Query: 295 AKAALIPALLYFGSVFWMVHLEAKRAGLKGLPKDECPSA---MAAVKERWYLLIPLVVLV 351
             A +IP L+    +    +  A++ G K L K+    A    A +   W L IP+V+  
Sbjct: 175 FAAGVIPGLVLATGLMVTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVI-- 232

Query: 352 WLLFSG-RTPMFAGTIGLALTAIVILGSAIILKVSNFALRIAFWIALGLLCAGFFQLGIG 410
              F+G R  +F  T   A+  + +L  A+                      G+ +    
Sbjct: 233 ---FAGTRYGLFTTTEAGAVVVVYVLFVAVF---------------------GYREFTFR 268

Query: 411 VIFGVIAALVAVCWFIKGGRDTLVICLHALVEGARHAVPVGIACALVGVIIGVVSLTGVA 470
            I  V+A  V         RD+ V+ +            +  A A  G  +   +   V 
Sbjct: 269 QIPEVLAEAV---------RDSAVVMI------------MICAAAAFGFYL---AWEQVP 304

Query: 471 STFAGYILAVGENNLFLSLLLTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPLIVS 530
              +G++    +N L + LL+ +L  +V+G  I      II + +  P +  +G+  +  
Sbjct: 305 QAMSGWLGEATDNPLLMLLLINVL-LIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHF 363

Query: 531 HMFVFYFGIMADLTPPVALACFAAAPIAKERGLKISMWAIRIAIAGFIVPFMAVYNPALM 590
            +       +A +TPPV    + ++ +     LK+ M    +A A  ++P++A+    L+
Sbjct: 364 GVVFITNLTIAGITPPVGGLMYISSMV-----LKVPM----MAYAREVLPYLAMMMVILV 414

Query: 591 M 591
           M
Sbjct: 415 M 415