Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 869 a.a., TRAP transporter, 4TM/12TM fusion protein from Phaeobacter inhibens DSM 17395

 Score =  329 bits (844), Expect = 3e-94
 Identities = 227/690 (32%), Positives = 347/690 (50%), Gaps = 76/690 (11%)

Query: 18  LFYVALLFSIYQIVTAAFHPVSSQVL--------RAGHVGFLLLLVFLCYPARGNGKPFQ 69
           L  VA+++S++Q+V A+  PVS+ +L        R  H+ F + L +  YPA  +    +
Sbjct: 38  LAIVAVIWSVFQVVLAS--PVSNLLLPGSVVNNSRQIHLAFAIFLAYAAYPALKSSPTDR 95

Query: 70  -PVA-WLLGLAGFATFFYQWYFEADLIQRSGDMTTADMVVGLTLIVLVFEAARRVMGIAL 127
            PV  W+L L G  T  Y + F   ++   G     D +     +VL+FE ARR +G A+
Sbjct: 96  IPVQDWILALIGTFTALYGYIFYEKIVNSGGKGDDIDTIFAAIGLVLLFEGARRALGPAM 155

Query: 128 PIICALFLAYGLLG--EYLPGDLAHRGYYLDQIVNQLSFGTEGLYGTPTYVSATYIFLFI 185
            I+ ++F+ Y   G  E +P  +  +G  LD+ + Q+   +EG++G    VS  ++FLF+
Sbjct: 156 AIVASVFMLYVFFGSSELVPDVIRWKGASLDRAMEQMWITSEGVFGIALGVSTKFVFLFV 215

Query: 186 LFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTTGQFTI 245
           LFG+ L++AG    F   A G  GH  GGPAK +VV SA  G I+GS +ANVVTTG FTI
Sbjct: 216 LFGALLDKAGAGNYFIKMAFGALGHLRGGPAKAAVVGSAATGLISGSSIANVVTTGTFTI 275

Query: 246 PLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPALLY 305
           PLMKR G+    AG VE  SS+  QIMPPVMGA AF+M E + + +VE+   A +PA + 
Sbjct: 276 PLMKRVGFSSEQAGSVEVASSVNGQIMPPVMGAAAFLMVEYVGISYVEVITHAFLPAAIS 335

Query: 306 FGSVFWMVHLEAKR-----AGLKGLPKDECPSAMAAVKERWYLL---------------- 344
           + ++ ++VHLEA +      G + +        MAA    +  L                
Sbjct: 336 YIALVYIVHLEAVKRNMPTLGNRVVSMGRTIGGMAAFFAGFAALCYGIQYPIKAITAAIP 395

Query: 345 ----IPLVVLVWLLFSGRTPMFAGTIGLA------------------------LTAIVIL 376
               + L +LV   + G   + AGT  L                         L  I++L
Sbjct: 396 GASGLVLSLLVVAAYLGLLWLAAGTDDLVPDDPNAAEVELPVVGEIYKAGLHYLLPIIVL 455

Query: 377 GSAIILKVSNFALRIAFWIALGLLCAGFFQLGIGVIFGVIAALVAVCWFIKGGRDTLVIC 436
              ++++  +  L  AFW    L      Q  +  +F   + L     F+ G  D     
Sbjct: 456 VYFLMIEQKSPGLS-AFWATALLFVILLTQKPLKALFRGQSTLAHS--FLDGVHD----L 508

Query: 437 LHALVEGARHAVPVGIACALVGVIIGVVSLTGVASTFAGYILAVGENNLFLSLLLTMLTC 496
            + L++GAR+ + + +A A  GVI+G V+LTGV    +  +  +   NL L L++  L  
Sbjct: 509 WNGLIDGARNMIGIALATATAGVIVGTVTLTGVGQVMSELVELMSGGNLILMLIMVGLLS 568

Query: 497 LVLGMGIPTIPNYIITSSIAAPALLDLG------VPLIVSHMFVFYFGIMADLTPPVALA 550
           LVLGMG+PT  NYI+ SS+ A  +++LG      VPLI  H+FVFYFGIMAD+TPPV LA
Sbjct: 569 LVLGMGLPTTANYIVVSSLMAGVVVELGAQSGLVVPLIAVHLFVFYFGIMADVTPPVGLA 628

Query: 551 CFAAAPIAKERGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGATLYMLFKAAFAV 610
            FAAA ++    ++    A   ++    +PF+ ++N  L++    W   + +   A  A+
Sbjct: 629 SFAAAAVSGGDAIRTGFVAFFYSLRTVALPFVFIFNTDLLLIDVGWVQGILVAISATIAI 688

Query: 611 GLWGAVFTGYLQRPMALWEKVLAFAAAASM 640
             + A    Y      ++E VL    A ++
Sbjct: 689 LAFTAGTMNYFITRNRIYESVLLVLVAFAL 718