Pairwise Alignments

Query, 475 a.a., drug resistance transporter, EmrB/QacA subfamily from Pseudomonas stutzeri RCH2

Subject, 476 a.a., multidrug transporter subunit MdtD from Ralstonia sp. UNC404CL21Col

 Score =  512 bits (1318), Expect = e-149
 Identities = 253/444 (56%), Positives = 327/444 (73%), Gaps = 2/444 (0%)

Query: 15  LPWLVAIAFFMQTLDGTILNTALPAMARDLAENPLRMQGVVIAYMLTVALLIPASGWIAD 74
           L WLVA+  FMQTLD TI+NTALPAMAR L+E+PL+MQ V+IAY LT A+L+PASGW+AD
Sbjct: 16  LLWLVAMGLFMQTLDSTIVNTALPAMARSLSESPLKMQSVIIAYTLTTAMLMPASGWMAD 75

Query: 75  RFGSRRIFVTAIVLFSVGSLLCALSTSFNQLVASRVLQGLGGALMLPVGRLVVLRAFPRS 134
           RFG+R++F  AI LF++GSLLCA S S   L+ASRV+QG+GGAL++PVGRL VLR  PR 
Sbjct: 76  RFGTRKMFFAAIFLFTIGSLLCAESRSLTMLIASRVVQGVGGALLMPVGRLTVLRVVPRE 135

Query: 135 EFVRIMAFIALPGLVGPLLGPTLGGWLVEYASWHWIFLINLPVGVIGCIAALRFMPDLKG 194
           +F+  M+F+ +PGL+GPL+GPTLGGWLVE  SWHWIFLIN+PVGVIG +  L+ MPD+  
Sbjct: 136 QFLPAMSFVTIPGLIGPLIGPTLGGWLVEAVSWHWIFLINIPVGVIGALVTLKVMPDVHA 195

Query: 195 PERVRFDTLGFVLFGAAMVLVTIALEGLGHMHMSHARVMLLLVVGAACMTAYWLRAGRID 254
            +  RFD  G+++    M  V+ +L+GL  +   HA V++LL+ G A +TAYWL AGR+ 
Sbjct: 196 EDDSRFDWSGYLMLAFGMAAVSFSLDGLSELGFQHATVLVLLIFGLAALTAYWLHAGRVA 255

Query: 255 APLFSPKLFRTRSFAVGIFGNLFARLGGGALPFLLPLLLQVALGYSPAQAGMSMIPLALG 314
            PLF   LF   SF++G+ GNLFAR+G G +PFL+PLLLQV+LGY+P QAG+ M+P+A  
Sbjct: 256 GPLFPRTLFGIPSFSIGVLGNLFARIGSGGMPFLIPLLLQVSLGYTPLQAGLMMVPVAAA 315

Query: 315 AMAVKSMAKPIIDRLGYRRLLIGNTLLLGGLIASLATIDTQTPTWLLLVHLGLIGMVNSM 374
            MA K +    I R GYRR+L  NT+++G ++AS A +    P WL +V L + G  NSM
Sbjct: 316 GMAAKPLGTWAIKRYGYRRMLSVNTVMVGLMMASFAVMTPNVPVWLRIVQLAIFGTFNSM 375

Query: 375 QFTAMNTVTLVGLSHADASSGNSLLSVVVQLSMSLGVATAGALLGGFTVDDA--QGSEVL 432
           QFTAMNT+TL  L+   AS+GNS+LS+V+ LSMSLGVA AGALL GFT   A  +G + L
Sbjct: 376 QFTAMNTLTLKDLTGPLASAGNSMLSMVMMLSMSLGVAAAGALLTGFTDFTAGPEGRDTL 435

Query: 433 HAFQLTFLCVGGMAMLAAALFLQL 456
            AF  TF+CVG M   AA +F QL
Sbjct: 436 AAFHKTFVCVGVMTCAAAWIFAQL 459



 Score = 25.4 bits (54), Expect = 0.004
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 286 PFLLPLLLQVALGYSPAQAGMSMIPLALGAMAVKSMAKPIIDRLGYRRLLIGNTLLLGGL 345
           P L PLL  VA+G        +++  AL AMA      P    L  + ++I  TL    L
Sbjct: 11  PSLKPLLWLVAMGLFMQTLDSTIVNTALPAMARSLSESP----LKMQSVIIAYTLTTAML 66

Query: 346 IASLATIDTQTPTWLLLVHLGLIGMVNSMQFTAMNTVTLVGLSHADASSGNSLLSVVVQL 405
           + +   +  +  T  +      +  + S+      ++T++  S      G +LL  V +L
Sbjct: 67  MPASGWMADRFGTRKMFFAAIFLFTIGSLLCAESRSLTMLIASRVVQGVGGALLMPVGRL 126

Query: 406 SM 407
           ++
Sbjct: 127 TV 128