Pairwise Alignments

Query, 391 a.a., Cytochrome D1 heme domain. from Pseudomonas stutzeri RCH2

Subject, 517 a.a., cytochrome d1 heme region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  107 bits (267), Expect = 8e-28
 Identities = 114/404 (28%), Positives = 175/404 (43%), Gaps = 53/404 (13%)

Query: 11  AGLLAACAQQPLRGTGDLGVVVERATGSLQIIESTNQSQLARVEGLGDLSHASVVFSRDQ 70
           AG +AA A        ++ +VVE     + +++  +   L R E    + H    F+ D 
Sbjct: 116 AGYVAAPAPVWDADPMNITLVVETGDHHVSVLDGDSWDVLDRFETPFAV-HGGPKFTPDG 174

Query: 71  RYAYVFGRDGGLTKVDLLRQRIDRRVIQGGNSIGGAISQDGTLIAVGNYEPGGVKVFNAN 130
            + +V  RDG + K DL   +   RV  G NS   A+S DG  +AV NY P  + + +  
Sbjct: 175 HFVFVMSRDGWVQKYDLWSLQEVGRVRAGLNSRNIAMSHDGKWLAVANYLPQTLTILSTE 234

Query: 131 TLEL--VADIPATPLADGSRNARVVGVIDVPGRR-FIYSLFDTDETWLLDFSQGNEPQIT 187
            L +  V D+    ++   + +RV  V   P R+ FI +L D  E W +      +P   
Sbjct: 235 DLSVARVMDV----ISKSGQTSRVSAVYQAPQRQSFILALKDAPEIWEVATDPEADPVYE 290

Query: 188 RF---------------EGI-------GRQPYDALL-TPEGRYYIAGLFGEDGMAKIDLW 224
            F               EG+         +P D    TP+ R+ I      DG       
Sbjct: 291 GFVHSREKDMVEAIASSEGLFARRRIETAEPIDDFFFTPDYRFLIGA--ARDGA------ 342

Query: 225 HPERGVERILDGYGRGQQKLPVYKMPHLEG---WTVAGNQTFV-PAVGQHRVLVMDSEKW 280
               GV   L+  GR   KLP+  MPHL     W     +    P + + ++ V+D E W
Sbjct: 343 ---HGVVVNLN-VGREIAKLPLPGMPHLGSGISWIRGDTRVMATPHLREGKLSVIDIESW 398

Query: 281 QQTDAIDVAGQPIFVMARPDARQIWVN-FAHPDNGKVQVIDSETHEIIADL--EPGPAVL 337
           +    I+  G   F+ +  +   +W + F  P+   + VID ++ EI+  L  EPG  V 
Sbjct: 399 EVLSTIETEGPGFFLRSHENTPYVWADVFFGPNKDVMHVIDKQSLEIVKTLRPEPGATVA 458

Query: 338 HMEFTARGDQLWLSV--RDGEEIQVWDPYTLKLLKRLPAHSPSG 379
           H+EF   G    +S+   DG  I V+D  TL+ +KRLP + PSG
Sbjct: 459 HVEFDRDGTHALVSIWEEDGAVI-VYDAATLEEVKRLPMNKPSG 501



 Score = 27.7 bits (60), Expect = 8e-04
 Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 14/91 (15%)

Query: 220 KIDLWHPERGVERILDGYGRGQQKLPVYKMPHLEGWTVAGNQTFVPAVGQHRVLVMDSEK 279
           +I  W PE+         G      PV+    +       N T V   G H V V+D + 
Sbjct: 99  EIPAWGPEQIAASATMNAGYVAAPAPVWDADPM-------NITLVVETGDHHVSVLDGDS 151

Query: 280 WQQTDAID----VAGQPIFVMARPDARQIWV 306
           W   D  +    V G P F    PD   ++V
Sbjct: 152 WDVLDRFETPFAVHGGPKFT---PDGHFVFV 179