Pairwise Alignments

Query, 130 a.a., prepilin-type N-terminal cleavage/methylation domain from Pseudomonas stutzeri RCH2

Subject, 123 a.a., type IV pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 62.4 bits (150), Expect = 2e-15
 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 15/124 (12%)

Query: 7   RGFTLIEVMIVVVIIGILASIALPNYRQYVIRSNRTAAQAQMLDIANRQQHFLLANRAYA 66
           +GFTLIE+MI V IIGILA+IA+P++ +Y+ +  R  AQ  ++  A   +     N  Y 
Sbjct: 6   KGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRNGLYP 65

Query: 67  DAAALTASGFSLSGEVSPHYSFDVTVGSGTVPSYLITFTAIGSQASD---GDLTLNNEGV 123
            + +L           SP+YSF  T    T   +  +  A+ +       G L+L+++GV
Sbjct: 66  ASQSLAN---------SPYYSFSYT---PTADKFGFSLKAVPTNRQSDPCGTLSLDHKGV 113

Query: 124 KTPA 127
           + PA
Sbjct: 114 RVPA 117