Pairwise Alignments

Query, 378 a.a., CBS-domain-containing membrane protein from Pseudomonas stutzeri RCH2

Subject, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 13/135 (9%)

Query: 242 DIMSRDVYSHTPDTFIEQAWSTLQRNRLRSLPVVSDARELVGIVTLVDLLKHFHPRPGRL 301
           DI+SR V   + +T I QA   L  N +  LP+V +  +L GI+T  D+ K         
Sbjct: 392 DILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAM------- 444

Query: 302 NFGQLKFLRGTKLRAIMSSPVVSVTPDTHMVELVYLLSDRGLHCLPVVDGERRLVGMITQ 361
              Q K      +  IM++ +VS TPD  +      +S   +  LPVVD   +++G+++ 
Sbjct: 445 --AQDKH----SISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSA 498

Query: 362 TDLIAALYRNWLRHL 376
            D+   + RN L  +
Sbjct: 499 EDISKLIGRNGLHKI 513



 Score = 39.7 bits (91), Expect = 2e-07
 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 10/79 (12%)

Query: 214 VTRDDLERLIKQTEKHALRRSMGEVTAADIMSRDVYSHTPDTFIEQAWSTLQRNRLRSLP 273
           +T  D+ + + Q +KH++         ++IM+  + S TPD  I+ A   + RN +  LP
Sbjct: 435 ITSWDIAKAMAQ-DKHSI---------SEIMTTYIVSATPDETIDMAARKMSRNNISGLP 484

Query: 274 VVSDARELVGIVTLVDLLK 292
           VV    +++G+V+  D+ K
Sbjct: 485 VVDSNNKVLGVVSAEDISK 503



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 17/55 (30%), Positives = 33/55 (60%)

Query: 314 LRAIMSSPVVSVTPDTHMVELVYLLSDRGLHCLPVVDGERRLVGMITQTDLIAAL 368
           ++ I+S PVV  + +T + +   +L +  ++ LP+VD   +L G+IT  D+  A+
Sbjct: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAM 444