Pairwise Alignments

Query, 378 a.a., CBS-domain-containing membrane protein from Pseudomonas stutzeri RCH2

Subject, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 4/131 (3%)

Query: 242 DIMSRDVYSHTPDTFIEQAWSTLQRNRLRSLPVVSDARELVGIVTLVDLLKHFHP--RPG 299
           D M+ +V   TP   ++    T+ RN  R LPVVS+ + LVGI+T  D +K F       
Sbjct: 150 DCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEEK-LVGIITSTDFVKLFGSDWAFN 208

Query: 300 RLNFGQLKFLRGTKLRAIMSSPVVSVTPDTHMVELVYLLSDRGLHCLPVVDGERRLVGMI 359
            +  G ++ +   +++ IM + +VSVT +  +V+ +  +++  +  LPVVDGE +L+G+I
Sbjct: 209 HMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGE-KLIGLI 267

Query: 360 TQTDLIAALYR 370
           T+ D++  +Y+
Sbjct: 268 TEKDIVKCIYK 278



 Score = 41.6 bits (96), Expect = 3e-08
 Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 12/151 (7%)

Query: 222 LIKQTEKHALRRSMGEVTAADIMSRDVYSHTPDTFIEQAWSTLQRNRLRSLPVVSDAREL 281
           L+K    H +  ++ E    +IM+ +V     +  +++      + ++  +PV+  +  L
Sbjct: 67  LVKFKHNHNMLSAINE-PVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVL 125

Query: 282 VGIVTLVDLLKHFHPRPGRLNFGQLKFLRGTKLRAIMSSPVVSVTPDTHMVELVYLLSDR 341
           +  +   D++K+   +         K L    ++  M+  VV  TP   + ++   +   
Sbjct: 126 ITTINERDVIKYLKDQVDE------KLL----VKDCMTENVVFATPGERLKDVARTMLRN 175

Query: 342 GLHCLPVVDGERRLVGMITQTDLIAALYRNW 372
           G   LPVV  E +LVG+IT TD +     +W
Sbjct: 176 GFRRLPVVS-EEKLVGIITSTDFVKLFGSDW 205



 Score = 30.4 bits (67), Expect = 6e-05
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 233 RSMGEVTAADIMSRDVYSHTPDTFIEQAWSTLQRNRLRSLPVVSDARELVGIVTLVDLLK 292
           R +  V   DIM  ++ S T +  +  A   +    +  LPVV D  +L+G++T  D++K
Sbjct: 216 REITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVV-DGEKLIGLITEKDIVK 274



 Score = 30.0 bits (66), Expect = 8e-05
 Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 12/125 (9%)

Query: 253 PDTFIEQAWSTLQRNRLRSLPVVSDARELV-GIVTLVDLLKHFHPRPGRLNFGQLKFLRG 311
           P T I +A + + +  +R + V       V GI+T +D++       G   +  +KF   
Sbjct: 17  PTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLG---GGSKYNLVKFKHN 73

Query: 312 TKL--------RAIMSSPVVSVTPDTHMVELVYLLSDRGLHCLPVVDGERRLVGMITQTD 363
             +        + IM+  VV +  +  + E++ L   + +  +PV+D    L+  I + D
Sbjct: 74  HNMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERD 133

Query: 364 LIAAL 368
           +I  L
Sbjct: 134 VIKYL 138