Pairwise Alignments

Query, 308 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (338), Expect = 2e-36
 Identities = 79/231 (34%), Positives = 131/231 (56%), Gaps = 5/231 (2%)

Query: 1   MNAVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLAPSEGQV 60
           M  +  + +S+++GS   L+D+NL L  G+ + L G NGAGKTT   L+ G + P+EG V
Sbjct: 1   MKLITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAV 60

Query: 61  KVLGRAPNDPQVRRQLGYLPENVTFYPQLSGRETLRHFARLKG----AALTQVDELLEQV 116
           ++LG AP    +  ++  LP++    P L+    L  FA+L+G    +A  +   +L  V
Sbjct: 61  EILGHAPGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALV 120

Query: 117 GLAHAADRRVKTYSKGMRQRLGLAQALLGEPKLLLLDEPTVGLDPIATQDLYQLIDRLRQ 176
            LA  A ++  + S GM +R+ +AQAL+G P+L+LLDEPT GLDP   + + +L+ R + 
Sbjct: 121 DLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELV-RAQI 179

Query: 177 RGTSIILCSHVLPGVEAHINRAAILAKGRLQAVGSLSQLRAEAGLPVRIRA 227
             T+ ++ SH L  +E   ++   L KG L    S+    A+  L + +++
Sbjct: 180 GKTTFVISSHNLAELEKLCDKVLYLDKGVLNQSISIQDELADEYLTLTMQS 230