Pairwise Alignments

Query, 308 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 302 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (373), Expect = 2e-40
 Identities = 87/224 (38%), Positives = 130/224 (58%), Gaps = 7/224 (3%)

Query: 1   MNAVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLAPSEGQV 60
           M  V+ QG+S+ YG+   L++++L L  G  + L G NGAGKTT   L+ G L PS G V
Sbjct: 1   MILVQCQGLSKHYGNKKALNNVSLTLEAGAPIALVGPNGAGKTTLFSLLCGYLTPSAGTV 60

Query: 61  KVLGRAPNDPQVRRQLGYLPENVTFYPQLSGRETLRHFARLKGAALTQVDE----LLEQV 116
           ++LG APN P +  Q+  LP++ T  P L+    L  FARL+G    Q ++    +L  V
Sbjct: 61  RILGEAPNSPTLLGQIAALPQDATLDPNLTIISQLSFFARLQGMDSKQANQEALRVLNLV 120

Query: 117 GLAHAADRRVKTYSKGMRQRLGLAQALLGEPKLLLLDEPTVGLDPIATQDLYQLIDRLRQ 176
            LA  A ++  + S GM +R+ +AQAL+G PKL+LLDEPT GLDP   + + +L+ R+  
Sbjct: 121 DLAEVAQQKPPSLSHGMSKRVAIAQALIGSPKLVLLDEPTAGLDPANAKKIRELV-RILS 179

Query: 177 RGTSIILCSHVLPGVEAHINRAAILAKGRLQAVGSLSQLRAEAG 220
             T+ ++ SH L  +E   ++   L KG L    S+S   + +G
Sbjct: 180 PTTTFVISSHNLDELEKLCDQVLYLDKGELSQ--SISMRSSNSG 221