Pairwise Alignments

Query, 725 a.a., Regulator of nitric oxide reductase transcription from Pseudomonas stutzeri RCH2

Subject, 502 a.a., putative ferredoxin-type protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 33/206 (16%)

Query: 510 FTAATILLWGRGVFCGWLCPFGALQELINEAARKLKIPQYELPFAVHERLWAIKYIILLV 569
           F     LL+GR ++C  +CP G  Q+ ++  + K K  ++    A+    + +  + +L 
Sbjct: 54  FLIVLTLLFGR-IYCSVICPLGVFQDAVSWFSGKQKKNRFRYSPALKWLRYGVLAVFILA 112

Query: 570 L----------------FGISLESMM-------------MAEKAAEVEPFKTAITLK-FD 599
           L                +G  + S++              AE+A     ++  + +K   
Sbjct: 113 LVAGLNAFVVLLAPYSAYGRMVSSLLAPVWQWGNNLLAYFAERAESYAFYEVDVWMKSLS 172

Query: 600 RQWWFVTYAVFLLVINIFTRKVYCRYVCPLGAALAIPTKLRLFDWLKRRKECGDPCQLCA 659
                V   + L V+     + YC  +CP+G  L   ++  +F  +    +C + C LCA
Sbjct: 173 TLIIAVITLIVLFVLAWRNGRTYCNTICPVGTVLGFISRYSIFKPVIDTSKC-NSCGLCA 231

Query: 660 KECEIQAIHPDG-RINANECHYCLDC 684
           + C+   I+     I+ + C  C+DC
Sbjct: 232 RNCKASCINAKAHEIDYSRCVACMDC 257



 Score = 29.6 bits (65), Expect = 4e-04
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 609 VFLLVINIFTRKVYCRYVCPLG 630
           +FL+V+ +   ++YC  +CPLG
Sbjct: 53  LFLIVLTLLFGRIYCSVICPLG 74



 Score = 26.2 bits (56), Expect = 0.004
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 487 HALFQDFRWELFLSDPVIFIIWTFTAATILLWGRG-VFCGWLCPFGALQELIN 538
           +A ++   W   LS  +I +I T     +L W  G  +C  +CP G +   I+
Sbjct: 159 YAFYEVDVWMKSLSTLIIAVI-TLIVLFVLAWRNGRTYCNTICPVGTVLGFIS 210



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 655 CQLCAKECEIQAIHPDGRI 673
           CQLC   C  Q + P G +
Sbjct: 357 CQLCVSVCPTQVLRPSGNL 375