Pairwise Alignments

Query, 332 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  280 bits (716), Expect = 4e-80
 Identities = 147/327 (44%), Positives = 209/327 (63%), Gaps = 3/327 (0%)

Query: 6   VAALVAALYWFSAPAMAAEAEPIVIKFAHVV-ADDTPKGKGALLLKQLVEQRMAGKVKVE 64
           +AA + A+  F+A A     E IVIKF+HV   D  PKG  A LL++ V + M GK  ++
Sbjct: 8   IAASILAVTSFNAAANCDPGE-IVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQ 66

Query: 65  VYPNSTLVGDAEEMQALFDNKVQLLAPSMSKFAPYTKKLQVFDLPFLFDDAEALQRFQKR 124
           V+PNSTL  D + ++AL +  VQL APS+SKF  +TKK ++FDLPFLF+D +A+ RFQ  
Sbjct: 67  VFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQSS 126

Query: 125 EAARQLLRSMADHGVYGLAYWNNGLKQLSATTPLRKPSDANGLAFRIQPSPVLEAQFAAV 184
               +L  +M   GV GL +W+NG+KQ+SA  P+  P+DA GL FR+Q S VL AQF  +
Sbjct: 127 AKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQFEQI 186

Query: 185 GAKSVVLPFAKVYESLKGGVVQGAENPWSNILSQNMHSVQPYITESNHGVLDYMLITNND 244
           GA    + FA+ Y  L+  V+ G EN WSNI  Q    VQ   TE+NHG+LDY+++T++ 
Sbjct: 187 GANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTSSK 246

Query: 245 FWLSMPFAVRSELEGIILEVTQAVNREAAAVNRRDRERILASGSSQLITLTPEERQAWRE 304
           +W  +P  VR +   I+ EVT   N E+  V   +++ I+ +G   + TLTPE+RQ W +
Sbjct: 247 WWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAG-GVVRTLTPEQRQQWVD 305

Query: 305 QMLPVWKTYEADIGADLIRAAMTVNRR 331
            + PVW+ +E DIGADLI AA+  N++
Sbjct: 306 ALKPVWQKFEKDIGADLIEAALAANQK 332