Pairwise Alignments

Query, 332 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 61.2 bits (147), Expect = 3e-14
 Identities = 44/239 (18%), Positives = 97/239 (40%), Gaps = 1/239 (0%)

Query: 17  SAPAMAAEAEPIVIKFAHVVADDTPKGKGALLLKQLVEQRMAGKVKVEVYPNSTLVGDAE 76
           + P++    E   ++   V     P    AL + + ++    G++ + V+P   L  +A 
Sbjct: 21  ATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAETNGRLSISVFPAGQLGNEAA 80

Query: 77  EMQALFDNKVQLLAPSMSKFAPYTKKLQVFDLPFLFDDAEALQRFQKREAARQLLRSM-A 135
            +Q +    + L     ++       +   + P++ D    + +  +   A +LL  + A
Sbjct: 81  MLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAKLVREPVAMKLLDVLPA 140

Query: 136 DHGVYGLAYWNNGLKQLSATTPLRKPSDANGLAFRIQPSPVLEAQFAAVGAKSVVLPFAK 195
           + G  GLA+    ++ + +   +    D NG+  RI  +P     +  +GA    +P   
Sbjct: 141 ETGTVGLAWGITTMRVVFSAKEIAGLDDINGMKLRINTTPAYRDFYQLLGAAPTPIPTPA 200

Query: 196 VYESLKGGVVQGAENPWSNILSQNMHSVQPYITESNHGVLDYMLITNNDFWLSMPFAVR 254
           V++++  G V G E       +Q    V   + + N   +  + + +   W ++P A R
Sbjct: 201 VFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIFMPCVALASGRVWQTLPEADR 259