Pairwise Alignments

Query, 341 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  271 bits (694), Expect = 1e-77
 Identities = 148/335 (44%), Positives = 211/335 (62%), Gaps = 7/335 (2%)

Query: 11  VFKSLVVAPFAALVLTLSPLIAQA-AEP--IVIKFAHVVGDDT-PKGKGALLFQTLVRER 66
           +FK L +   AA +L ++   A A  +P  IVIKF+HV   D  PKG  A L +  V E 
Sbjct: 1   MFKPLTL--IAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEE 58

Query: 67  LAGKVDVEVYPNSTLVGDADEMQALLDNKVQMLAPSLSKFIEYSPKLEVFDLPFLFDDDA 126
           + GK  ++V+PNSTL  D   ++ALL+  VQ+ APSLSKF +++ K  +FDLPFLF+D  
Sbjct: 59  MNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVD 118

Query: 127 AVARFQKREASRDLLRSMAGRGIYGLAYWNNGLKQLSANQPLQTPADAAGLAFRIQPSPV 186
           AV RFQ      +L  +M  RG+ GL +W+NG+KQ+SAN+P+  PADA GL FR+Q S V
Sbjct: 119 AVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDV 178

Query: 187 LEAQFAAVDAKAVRLPFSEVSKAMQSGTVQGTEGPWSNIRGQNAGLKQSYVTETNHGVLN 246
           L AQF  + A   ++ F+E    +Q+  + G E  WSNI GQ     Q   TETNHG+L+
Sbjct: 179 LVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILD 238

Query: 247 YMLVTNSEFWTSIPFAVRSELENIVLEVTQTVNAEAAAINQREREQILASGNTTLVTLTP 306
           Y++VT+S++W  +P  VR +   I+ EVT   NAE+  + +  ++ I+ +G   + TLTP
Sbjct: 239 YLVVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGG-VVRTLTP 297

Query: 307 AQRQAWRVKMQPVWKSFEAHIGADIMRAALAVNRR 341
            QRQ W   ++PVW+ FE  IGAD++ AALA N++
Sbjct: 298 EQRQQWVDALKPVWQKFEKDIGADLIEAALAANQK 332