Pairwise Alignments

Query, 341 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 324 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 11/292 (3%)

Query: 21  AALVLTLSPLIAQAAEPIVIKFAHVVGDDTPKGKGALLFQTLVRERLAGKVDVEVYPNST 80
           A   +  S L A A     +K+AHV     P    ++     + +R  G+  ++V+P S 
Sbjct: 11  ATATILASALSAHAQT--ALKWAHVYETSEPFHTESVWAAEEIAKRTEGRYKIDVFPASQ 68

Query: 81  LVGDADEMQALLDNKVQMLAPSLSKFIEYSPKLEVFDLPFLFDDDAAVARFQKREASRDL 140
           L  +AD  Q L    V ++    S        + V   P++F D A +  + K +  + L
Sbjct: 69  LGKEADINQGLKLGTVDIIISGSSFAARDHAPIGVTYFPYIFRDPAHMIAYTKSDVFKRL 128

Query: 141 L---RSMAGRGIYGLAYWNNGLKQLSANQPLQTPADAAGLAFRIQPSPVLEAQFAAVDAK 197
                  +G  I  + Y+  G +  ++N+P+   AD  GL  R+   P   A   A  A 
Sbjct: 129 AAGYEEASGNHITAVTYY--GTRHTTSNRPIAKCADMQGLKMRVPDVPAYLAMPRACGAN 186

Query: 198 AVRLPFSEVSKAMQSGTVQGTEGPWSNIRGQNAGLKQSYVTETNHGVLNYMLVTNSEFWT 257
              + F+EV  A+Q+GTV+  E P + I  +     Q ++  T H V +   V +   W+
Sbjct: 187 TTPIAFAEVYLALQNGTVEAQENPLTTIEAKKFFEVQKHIVLTGHIVDHLNTVVSKNLWS 246

Query: 258 SIPFAVRSELENIVLEVTQTVNAEAAAINQREREQILASGNTTLVTLTPAQR 309
            +  A +     I  EV Q     A  I +   ++++A+     + +T   R
Sbjct: 247 QLSDADK----QIFTEVMQEAAVRATKIIEEREKELVATFKERGIEVTEVDR 294