Pairwise Alignments

Query, 265 a.a., Bacterial regulatory helix-turn-helix proteins, AraC family. from Pseudomonas stutzeri RCH2

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 26/79 (32%), Positives = 40/79 (50%)

Query: 180 LADLLQTVPLGQRQLERLFRHHVGMTPKQFSRIQRVALVRNQLRAGQPLLDTALACGYSD 239
           L +L Q   L    L R F+   G+ P  +    R+ L +  L+ G  + +TA  CG+ D
Sbjct: 196 LEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHD 255

Query: 240 QAHFIHDFKTVVGMTPGRY 258
           Q+H    FK  +G+TP +Y
Sbjct: 256 QSHLHRHFKKALGITPKQY 274



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 191 QRQLERLFRHHVGMTPKQFSR 211
           Q  L R F+  +G+TPKQ++R
Sbjct: 256 QSHLHRHFKKALGITPKQYAR 276