Pairwise Alignments

Query, 265 a.a., Bacterial regulatory helix-turn-helix proteins, AraC family. from Pseudomonas stutzeri RCH2

Subject, 250 a.a., HTH-type transcriptional activator RhaS from Enterobacter sp. TBS_079

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 165 QQLLSEITATEGRARLADLLQTVPLGQRQLERLFRHHVGMTPKQFSRIQRVALVRNQLRA 224
           +  LS +TA      L DL +   L +  L R F+   G+TP +F  I RV   + +LRA
Sbjct: 147 EAFLSNLTAPPS---LDDLARRFSLRKETLIRTFKQDTGLTPGRFLNISRVEYAKARLRA 203

Query: 225 GQPLLDTALACGYSDQAHFIHDFKTVVGMTPGRYRASK 262
           G  L D     G++DQ+HF   F +    TP +Y   +
Sbjct: 204 GDDLADVGYQSGFADQSHFHKTFVSYTAATPRQYATGR 241