Pairwise Alignments

Query, 601 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

Subject, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  302 bits (774), Expect = 2e-86
 Identities = 178/491 (36%), Positives = 277/491 (56%), Gaps = 7/491 (1%)

Query: 110 VDIRVDLFKHLTGHPMRYFTEHFAGSLGNRISAVGQAAGAIYGGLAWKIVPPIVDFLGAV 169
           + IR    ++L    + ++ + FAG +  ++     A            V  +V F   V
Sbjct: 115 MSIRWLAHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIV 174

Query: 170 VVLLTVDVRMAVALILFVAIVAVLITGFGIRGRYKHQRFAAQSARVGGELVDAVSNVWTI 229
           V+L   D R+ + +++++AI   +   +  + +      A   + + G +VD+ +N+ T+
Sbjct: 175 VILAQADWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTV 234

Query: 230 KAFSARDREAERLAHEIGFEARAQRRSWMYLEKARVMHDICLSVMAGGMLIWAIQLWVGG 289
           K FS   RE +     +        R    +    +  ++   ++   +   +I LW+  
Sbjct: 235 KLFSHSQRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITS 294

Query: 290 EVTAGDVVLVSALTFRILHGSRDLALALVDATQQIGAIDDTLRIIVQPHGLDDSDNQ--L 347
            ++ G + +  +L+ RI   S+ +   +    + IG + D + ++ +P  + D  +   L
Sbjct: 295 AISVGAIAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPL 354

Query: 348 MLAEGDITFERIGFSYPDRGAVFEGLDLHIPAGQKVGVVGSSGAGKSTLINLIQRLDDVQ 407
           ++  G ITF+ + F Y +   V   L+L+I  G+KVG+VG SGAGKSTL+NL+ R  DV+
Sbjct: 355 VVKHGGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVE 414

Query: 408 DGRILIDGQDIRSVSQDSLREKIAVVPQETALFNRSIRENIRYGRPDASDEEVVAAARSA 467
            GRILIDGQ I  V+Q+SLR KI +V Q+T+L +RSIR+NI YG P+A++E+++ A   A
Sbjct: 415 SGRILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQA 474

Query: 468 FCDGFIRELPQ-----GYDTLVGERGVMLSGGQRQRLGIARAFLKDAPILILDEATSALD 522
               FI  L       GYD  VGERGV LSGGQRQR+ I+R  LKDAP+L+LDEATSALD
Sbjct: 475 HAHEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALD 534

Query: 523 TQSEGEIQAALNNLVHNRTVVAVAHRLSTLASFDRIIVLRDGRIVEDGPPQELRRQGGEF 582
           ++ E  IQ +LN L+  +TV+A+AHRLST+A+ DR+IVL  G+IVE G  QEL  Q G +
Sbjct: 535 SEVEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIY 594

Query: 583 DALWRMQAEGF 593
             LW  Q  GF
Sbjct: 595 AHLWAHQTGGF 605