Pairwise Alignments

Query, 601 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

Subject, 582 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  249 bits (636), Expect = 2e-70
 Identities = 169/487 (34%), Positives = 259/487 (53%), Gaps = 13/487 (2%)

Query: 111 DIRVDLFKHLTGHPMRYFTEHFAGSLGNRISAVGQAAGAIYGGLAWKIVPPIVDFLGAVV 170
           ++RV+ ++H+    + YF +   G L  R++      G +   +     P I+  +  + 
Sbjct: 98  NLRVNTYRHIQSLSLSYFEKAKTGDLTYRMTEDIDRVGEVVNKVFHDATPSILQLIVVLS 157

Query: 171 VLLTVDVRMAVALILFVAIVAVLITGFGIRGRYKHQRFAAQSARVGGELVDAVSNVWTIK 230
            ++ ++  + +A+++   I+  L+  FG +     +R  ++ + +   L +  S +  ++
Sbjct: 158 YMIYLNWTLTLAILVIAPIMGFLVGWFGQQMLVFSRRSQSRISDLSSLLTEVFSGIRLVR 217

Query: 231 AFSARDREAERLAHEIGFEARAQ-RRSWMYLEKARVMH-----DICLSVMAGGMLIWAIQ 284
           AF+A   E ER + E      A+ R +W+   +  V+       I   V+ G   I   Q
Sbjct: 218 AFAAEPYEIERFSREAERNREARYRTAWLRAIQYPVIGFLQAASILFIVVLGSWQISTGQ 277

Query: 285 LWVGGEVTAGDVVLVSALTFRILHGSRDLALALVDATQQIGAIDDTLRIIVQPHGLDDSD 344
           L   G      V  ++ L   I+H   D           +  ID+ L I  +P   +D  
Sbjct: 278 L--NGPNLGSYVAAIAMLIDPIVH-LIDNFNEFKQGQASLDRIDELLSI--EPAVQEDPQ 332

Query: 345 NQLMLA-EGDITFERIGFSY-PDRGAVFEGLDLHIPAGQKVGVVGSSGAGKSTLINLIQR 402
           ++++    G + F ++ FSY  D   V   L+L +  G+ V +VG+SGAGKSTL+NLI R
Sbjct: 333 SRMLPPITGKVEFRQVSFSYRSDSAPVLRQLNLTVEPGEAVALVGASGAGKSTLVNLIPR 392

Query: 403 LDDVQDGRILIDGQDIRSVSQDSLREKIAVVPQETALFNRSIRENIRYGRPDASDEEVVA 462
             D QDG IL+DG  IRSV+  SLR +I +VPQET LF+ +I +NI +G+       V  
Sbjct: 393 FYDPQDGEILVDGIPIRSVTLGSLRRQIGIVPQETILFSGTIAQNIAFGQRQFDRAAVEE 452

Query: 463 AARSAFCDGFIRELPQGYDTLVGERGVMLSGGQRQRLGIARAFLKDAPILILDEATSALD 522
           AAR A    FI ++P GYDT VGERGV LSGGQRQRL IARA L D  ILILDEATSALD
Sbjct: 453 AARIANAHQFISQMPDGYDTWVGERGVNLSGGQRQRLAIARAVLLDPRILILDEATSALD 512

Query: 523 TQSEGEIQAALNNLVHNRTVVAVAHRLSTLASFDRIIVLRDGRIVEDGPPQELRRQGGEF 582
           ++SE  +Q AL  ++  RTV  +AHRL+T+ +  RI+V+  G+IVE G    L  + G +
Sbjct: 513 SESETLVQEALERVMQGRTVFIIAHRLATVRNASRILVMERGQIVEAGNHDALLAEAGRY 572

Query: 583 DALWRMQ 589
              +  Q
Sbjct: 573 ARYYAQQ 579