Pairwise Alignments

Query, 601 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

Subject, 591 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  281 bits (719), Expect = 5e-80
 Identities = 187/572 (32%), Positives = 297/572 (51%), Gaps = 12/572 (2%)

Query: 25  LWHYICARPWHFGGLLALIIGAASCAVAVQYGMKLLVDAMAQGTADRGAANVWWPLGLFI 84
           LW Y+          LA ++ A   +V + + +K LVD +++ + ++  A    P+ L +
Sbjct: 22  LWPYLLEFKGRVILALACLVVAKMASVGLPFVLKQLVDTLSEASVEQMIAV---PIALVL 78

Query: 85  G---LIVTENVFWRLGGWLGCRTVVASVVDIRVDLFKHLTGHPMRYFTEHFAGSLGNRIS 141
               L +   V   +   L  R    ++  + + +F HL    + +  E   G L   I 
Sbjct: 79  AYGSLRLLNTVISEVRDTLFGRVTERAIRRLGLSVFDHLHRLDLAFHLERRTGGLSRDIE 138

Query: 142 AVGQAAGAIYGGLAWKIVPPIVDFLGAVVVLLTVDVRMAVALILFVAIVA-VLITGFGIR 200
                   +   + + IVP +++ +G VV +L  +   A ALI   A+VA +L + F   
Sbjct: 139 RGTSGVSFLMRFMVFNIVPTLLE-IGLVVGILLYNYGWAFALITLSAVVAYILFSIFATE 197

Query: 201 GRYKHQRFAAQS-ARVGGELVDAVSNVWTIKAFSARDREAERLAHEIGFEARAQRRSWMY 259
            R    R AA + ++     +D++ N  T+K F+    E+E+  H +     A+R++ + 
Sbjct: 198 WRTGFVREAAMADSQSNTRAIDSLLNYETVKYFNNEAYESEQYDHALERWEVAKRKNRLS 257

Query: 260 LEKARVMHDICLSVMAGGMLIWAIQLWVGGEVTAGDVVLVSALTFRILHGSRDLALALVD 319
           L        + +S+    ML  A      G +T GD VL++A   ++      L     +
Sbjct: 258 LFALNAGQALIISLAMTLMLALAATQVSQGAMTIGDFVLINAFMMQLFMPLNFLGFVYRE 317

Query: 320 ATQQIGAIDDTLRIIVQPHGLDDSDNQL--MLAEGDITFERIGFSYPDRGAVFEGLDLHI 377
               +  I+    ++ +   ++D  +     +A+G + FE + F Y DR  +   +   I
Sbjct: 318 IRGALANIERMFSLLDRQPKIEDGPDATSPQIAQGSLKFEGVSFRYGDR-PILSDVSFEI 376

Query: 378 PAGQKVGVVGSSGAGKSTLINLIQRLDDVQDGRILIDGQDIRSVSQDSLREKIAVVPQET 437
           PAG KV +VG SGAGKST++ L+ R  + Q G I IDG D ++++Q +LR  IA+VPQ+T
Sbjct: 377 PAGHKVAIVGDSGAGKSTIVKLLFRFYETQQGTITIDGHDTKALTQHALRSAIAIVPQDT 436

Query: 438 ALFNRSIRENIRYGRPDASDEEVVAAARSAFCDGFIRELPQGYDTLVGERGVMLSGGQRQ 497
            LFN S+ ENIRYG P ASDE+V AA   A    F+ +L +G+ T VGERG+ LSGG++Q
Sbjct: 437 VLFNDSLMENIRYGLPGASDEQVKAAIELAHLSNFVSQLSEGWHTKVGERGLKLSGGEKQ 496

Query: 498 RLGIARAFLKDAPILILDEATSALDTQSEGEIQAALNNLVHNRTVVAVAHRLSTLASFDR 557
           R+ IARA LK +P+L+ DEATS+LD+ SE  I  AL  +    T + +AHRLST+   D+
Sbjct: 497 RVAIARAILKGSPLLVFDEATSSLDSHSEQAILNALKEMAKGHTSLVIAHRLSTVVDADQ 556

Query: 558 IIVLRDGRIVEDGPPQELRRQGGEFDALWRMQ 589
           I+VL  G+IVE G  Q L    G +  LW +Q
Sbjct: 557 ILVLSQGKIVERGDHQSLLAADGLYKKLWTVQ 588