Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 42/345 (12%)

Query: 23  LLGGCSSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTSTQLSFEVSGRIERIL 82
           L+      A+   +PP +++V     ++  +++L   G +++  S  ++ EV+G+++ I 
Sbjct: 15  LMNSAVLSAKEPNQPPAISVVTESVQSQQISQSLSVVGKLKAEQSVDIAAEVAGKVDMIA 74

Query: 83  IDEGTRVRRGQTLAQLDRTDYRLQLREAEARLRQLEADLARKRTLLAEGILAPAAIEALQ 142
           +    +V++GQ L +LD    +  L EA+A L+  +  L     LL    + P  I+A +
Sbjct: 75  VQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQRKLTEYERLLKRNAITPTEIDAQR 134

Query: 143 ANTVAARVARDSAQRNIDHSTLTAPFDGVVARRLAEPDMVVAVGTPVFEMQDNRHIEVSV 202
           A     +   ++AQ N+    +TAPFDG V          V+ G+ +  + +   + + +
Sbjct: 135 ARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFSRGKWVSAGSELLTLDNLSLMRLDL 194

Query: 203 DLPESAALSIPLG----------PELQAEAELVIADLR-----LPLRYKEHSTQPREGAR 247
            +PE     +  G          P +Q E  +V  D R     L LR + H   P     
Sbjct: 195 QIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVDSRINQETLNLRVRVHFPNP----- 249

Query: 248 TYRLVLQGEPPEDFNLLPGMAMRVRLERPAQPETDNDGFRLPLSALQTGSDGKHFIWQ-A 306
                       D  L PGM M  R+  PA          +P+ AL+  S  K F++   
Sbjct: 250 ------------DQRLKPGMLMSARIHFPAISAP-----IIPVQALEY-SGTKRFVYVIG 291

Query: 307 ADGRARRLAVEL-QQVEGDQALIRGDALQAQLPIIVAGGSKLHDD 350
            D  A+R  V L  +VE    + +G  LQ    I+V G   + D+
Sbjct: 292 EDNVAKRREVSLGARVENQVVIEKG--LQIGEKIVVQGIVNMRDN 334