Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 86/300 (28%), Positives = 130/300 (43%), Gaps = 31/300 (10%)

Query: 23  LLGGCSSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTSTQLSFEVSGRIERIL 82
           +L GCS E     E  R   V  +  A    E L +SG V++ T   L F V G+I   L
Sbjct: 24  VLSGCSQEKVETKETIRPVKVVEIAAAGEPRE-LHYSGSVRARTEMNLGFRVGGKITERL 82

Query: 83  IDEGTRVRRGQTLAQLDRTDYRLQLREAEARLRQLEADL-------ARKRTLLAEGILAP 135
           ++ G RV+ G  LA++D TDYRL +  AEA L   E  +        R   L  +   + 
Sbjct: 83  VNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALAKLRAEQLFTKSFSSQ 142

Query: 136 AAIE---ALQANTVAARVARDS----AQRNIDHSTLTAPFDGVVARRLAEPDMVVAVGTP 188
           A ++    L    V+ R A  S    A+  + ++ L A  +G+V    A+   VV  GTP
Sbjct: 143 AQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVTAVNADIGQVVGTGTP 202

Query: 189 VFEMQDNRHIEVSVDLPESAALSI----PLGPELQAEAELVIADLRLPLRYKEHSTQPRE 244
           V  +  +   EV + +PE          P+G    +   LV     L    +E S    +
Sbjct: 203 VVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLV-----LDGHVREVSGSADQ 257

Query: 245 GARTYRLVLQGEPPEDFNLLPGMAMRVRLERPAQPETDNDGFRLPLSALQTGSDGKHFIW 304
            +RT+   ++   P D  +L GM   V     A   +      +PLSAL +  DG++ +W
Sbjct: 258 RSRTFS--VRVSLPNDERVLLGMTATVE----AAAASSAPLVSIPLSAL-SKKDGQNIVW 310