Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Pseudomonas fluorescens SBW25-INTG

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 39/357 (10%)

Query: 23  LLGGCSSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTSTQLSFEVSGRIERIL 82
           LL  C  E E      R A+V   +P+    ++  + G V++     L+F + G++ + L
Sbjct: 17  LLAACGHE-EATQTTIRPAMVVQPQPSAQSMDS--YPGEVRARYEPDLAFRIGGKVSKRL 73

Query: 83  IDEGTRVRRGQTLAQLDRTDYRLQLREAEARLRQLEADLA-------RKRTLLAEGILAP 135
           ++EG RV+  Q LA+LD  D RLQL    A++   EA+L+       R +TL+   +++ 
Sbjct: 74  VEEGERVKANQALAELDPQDVRLQLEATRAQVAAAEANLSLVRAERDRYKTLMDRQMVSR 133

Query: 136 AAIE-------ALQANTVAARVARDSAQRNIDHSTLTAPFDGVVARRLAEPDMVVAVGTP 188
           +  +       + +A     +   D A     ++ L AP DGVVA+R  E   VV+ G  
Sbjct: 134 SQYDNSENLYRSGEARLKQIKAEFDVASNQAGYAVLRAPQDGVVAKRAVEVGQVVSAGQT 193

Query: 189 VFEMQDNRHIEVSVDLPESAALSIPLGPELQAEAELVIADLRLPLRYKEHSTQPREGART 248
           VF +  +   EV + LPE       +G  +  E      D R   R +E S      +RT
Sbjct: 194 VFTLATDGEREVLISLPEQGFGRFKIGQPVSVEL-WSQPDQRFSGRIRELSPAADPKSRT 252

Query: 249 YRLVLQ---GEPPEDFNLLPGMAMRVRLERPAQPETDNDG---FRLPLSALQTGSDGKHF 302
           +   +    G+ P +     G + RV ++         DG     +PLSAL +  +G  +
Sbjct: 253 FAARVAFTGGKVPAEL----GQSARVFIQA--------DGIIPLSVPLSAL-SAENGASY 299

Query: 303 IWQA-ADGRARRLAVELQQVEGDQALIRGDALQAQLPIIVAGGSKLHDDQPIEARER 358
           +W+   D   +R+ V +    G++ +   + L     +I AG   LH+ Q +   +R
Sbjct: 300 VWRVQPDNTLKRVPVRIGAF-GEKTVPVLEGLSPTDWVIAAGVHVLHEGQQVRPVDR 355