Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 360 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (346), Expect = 3e-37
 Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 21/345 (6%)

Query: 23  LLGGCSSE-AEPAPEPPRVALVEPLRPAESKAEALR-FSGVVQSVTSTQLSFEVSGRIER 80
           +L GCS+E AE APE  R   V+ L   E  +  LR F   V +    +LSF +SG++  
Sbjct: 16  VLAGCSTESAEIAPESVRP--VKLLEITELGSGTLRSFPAKVAATKQAELSFRLSGQLIE 73

Query: 81  ILIDEGTRVRRGQTLAQLDRTDYRLQLREAEARLRQLEADLARKRTLLAEGILAPAAIEA 140
             + +G RV +G+ LA+LD  D R QL   EA     +AD  RK  LL + +++ A  + 
Sbjct: 74  FSLVDGQRVTKGEVLARLDDRDARNQLLNREADHELAQADFNRKGELLRQALISQAEYDL 133

Query: 141 LQANTVAARVARDSAQRNIDHSTLTAPFDGVVARRLAEPDMVVAVGTPVFEMQDNRHIEV 200
            +A   ++     SAQ  + ++ + APF G VA+   E   +V    PV  +Q +R I+V
Sbjct: 134 AKAQLKSSAANLASAQDQLSYTVIKAPFSGTVAKTKIENFQIVQANQPVLVLQKDRFIDV 193

Query: 201 SVDLPESAALSI----PLGPELQAEAELVIADLRLPLRYKEHSTQPREGARTYRLVLQGE 256
            + +PES A  +    P  P L         + +   R KE +TQ   G ++Y +V    
Sbjct: 194 VIQVPESLASRVTSFNPHSPSLPMVTFSNHPEQQYAARLKEFATQVTPGTQSYEVVFTLP 253

Query: 257 PPEDFNLLPGMAMRVRLERPAQPETDNDGFRLPLSALQTGSDGKHFIWQAADG----RAR 312
            P +F++LPGM+ ++ L+              P + L+   DG+  +W    G     AR
Sbjct: 254 TPTEFSVLPGMSAQLILDIAGPDAKKKSAIVPPSAVLKRDQDGEPIVWTYDLGTGQVSAR 313

Query: 313 RLA---VELQQVEGDQALIRGDALQAQLPIIVAGGSKLHDDQPIE 354
           +++   V  Q +E  Q L  GD       ++VAG ++LH+ Q ++
Sbjct: 314 KVSLGKVTSQGIEITQGLTVGDR------VVVAGVAQLHESQQVK 352