Pairwise Alignments

Query, 431 a.a., NADH dehydrogenase, FAD-containing subunit from Pseudomonas stutzeri RCH2

Subject, 463 a.a., Probable NADH dehydrogenase Ndh from Mycobacterium tuberculosis H37Rv

 Score =  149 bits (376), Expect = 2e-40
 Identities = 120/425 (28%), Positives = 196/425 (46%), Gaps = 38/425 (8%)

Query: 3   HRIVIVGGGAGGLELATRLGRTLGKRGRARITLVDANLTHIWKPLLHEVAAGSLNSSA-D 61
           HR+VI+G G GGL  A +L     KR    I L+     H+++PLL++VA G ++     
Sbjct: 15  HRVVIIGSGFGGLNAAKKL-----KRADVDIKLIARTTHHLFQPLLYQVATGIISEGEIA 69

Query: 62  ELNYVAQAKWNHFEFQMGRMAGLDRANKCIRLEATRDEFGVELVPSRSLSYDTLIIAVGS 121
               V   K  + +  +G +  +D A +C+  E     +           YD+LI+A G+
Sbjct: 70  PPTRVVLRKQRNVQVLLGNVTHIDLAGQCVVSELLGHTY--------QTPYDSLIVAAGA 121

Query: 122 TTNDFGTLGAAEHCIFLDTREQAERFHRQLLSHYMKAHAG---EGASSDISMAIVGAGAT 178
             + FG    AE    + + + A     ++LS + +A      E  +  ++  +VGAG T
Sbjct: 122 GQSYFGNDHFAEFAPGMKSIDDALELRGRILSAFEQAERSSDPERRAKLLTFTVVGAGPT 181

Query: 179 GVELAAELLHAAKELAAYGLDGIKPEDVKITLIEAGPKVLPALPERISQPVHQTLLNLGV 238
           GVE+A ++   A+         I     ++ L++A P VLP +  ++ Q     L  LGV
Sbjct: 182 GVEMAGQIAELAEHTLKGAFRHIDSTKARVILLDAAPAVLPPMGAKLGQRAAARLQKLGV 241

Query: 239 TVLTGAAVSEVTAEGLQTKQG----QFVPASLKVWAAGIKAPAF---LHELDGLETNRIN 291
            +  GA V++V   G+  K      + + ++ KVW+AG+ A      L E   +E +R  
Sbjct: 242 EIQLGAMVTDVDRNGITVKDSDGTVRRIESACKVWSAGVSASRLGRDLAEQSRVELDRAG 301

Query: 292 QLVVHPTLQSTRDDNIFAFGDCAACPQPDSDRNVPPRAQAAHQQASMLARSIRNRLEG-- 349
           ++ V P L      N+F  GD AA         VP  AQ A Q A  +A +I+  L G  
Sbjct: 302 RVQVLPDLSIPGYPNVFVVGDMAAV------EGVPGVAQGAIQGAKYVASTIKAELAGAN 355

Query: 350 -KPLPTYRYKDYGSLISLSSFSAVGNLMGNLTGNVMLEGWLARMFYISLYRMHQIALYGV 408
                 ++Y D GS+ ++S FSAV  +     G V   G++A + ++ L+  + I     
Sbjct: 356 PAEREPFQYFDKGSMATVSRFSAVAKI-----GPVEFSGFIAWLIWLVLHLAYLIGFKTK 410

Query: 409 PRTLL 413
             TLL
Sbjct: 411 ITTLL 415