Pairwise Alignments

Query, 431 a.a., NADH dehydrogenase, FAD-containing subunit from Pseudomonas stutzeri RCH2

Subject, 442 a.a., FAD-dependent oxidoreductase from Methanococcus maripaludis S2

 Score = 51.6 bits (122), Expect = 5e-11
 Identities = 78/370 (21%), Positives = 146/370 (39%), Gaps = 53/370 (14%)

Query: 5   IVIVGGGAGGLELATRLGRTLGKRGRARITLVDANLTHIWKPLLHEVAAGSLNSSADELN 64
           +VI+G GAGGL  A+ + +       A++T++ ++    + P       G   +  D + 
Sbjct: 3   VVIIGSGAGGLTTASNIKK---HDKNAKVTVITSDKYIAYSPCAIPYVIGEEIADFDTII 59

Query: 65  YVAQAKWNHFEFQMGRMAGLDRANKCIRLEATRDEFGVELVPSRS---LSYDTLIIAVGS 121
                 +        +  G+D   +   L+    E  V      +   L YD L++A G 
Sbjct: 60  MHTPKDY--------KAKGIDVIVEAEVLDVVSGENKVIYKKDGTETELKYDNLVLATGG 111

Query: 122 TTNDFGTLGAAEHCIF-LDTREQAERFHRQLLSHYMKAHAGEGASSDISMAIVGAGATGV 180
           T       G     +F + T E  ++               E A    ++ + GAGA G+
Sbjct: 112 TPFVPPIEGVTLDGVFKVRTIEDGQKI-------------TEWAKDTKNVVVAGAGAIGI 158

Query: 181 ELAAELLHAAKELAAYGLDGIKPEDVKITLIEAGPKVLP-ALPERISQPVHQTLLNLGVT 239
           E+A                G+K   + +T++E  P+V P AL   +++ V + L   G+ 
Sbjct: 159 EIAF---------------GLKEIGLDVTVVEMVPQVFPRALDPDMAETVQKYLEEQGIK 203

Query: 240 VL----TGAAVSEVTAEGLQTKQGQFVPASLKVWAAGIKAPAFLHELDGLETNRINQLVV 295
           ++     G  +     E +   + + +PA + + + G+++   L +  G +  R    V+
Sbjct: 204 IILEKPVGKIIGNDKVEAVLVGE-ETIPAEMVIMSTGVRSNIELAKSAGCDIGR--WAVL 260

Query: 296 HPTLQSTRDDNIFAFGDCAACPQPDSDRN-VPPRAQAAHQQASMLARSI-RNRLEGKPLP 353
                 T   NI+A GDC       + +N + P    A +Q  + A++I +   E KP+ 
Sbjct: 261 TNEKMQTSIPNIYAVGDCVEVIDAITMQNTLSPFGTTAVRQGKVAAKAIVKLEAEIKPVL 320

Query: 354 TYRYKDYGSL 363
                  G L
Sbjct: 321 NSMVSKIGKL 330