Pairwise Alignments

Query, 456 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (281), Expect = 1e-29
 Identities = 64/166 (38%), Positives = 98/166 (59%), Gaps = 2/166 (1%)

Query: 291 LEAGRDVLTRLLNRKFLPVVMAKEVLYARQSNNAFGVLAIDVDHFKRINDTYGHEAGDQV 350
           L +  D LT L NR      +       ++  +A  ++ +D+DHFKR+NDTYGH+AGD+V
Sbjct: 153 LLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHALSLVMLDIDHFKRVNDTYGHQAGDKV 212

Query: 351 LQQVGALLASNTRGGDYAFRLGGEEFLLVLVDIDASKALAAAEKLRERIAREHFRLSSGD 410
           ++QV  LL  + R  D   R GGEEF +VL D D+S A A AE++R  +      L +  
Sbjct: 213 IEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGAHAFAERMRHSVEALEV-LYNDQ 271

Query: 411 VLQVTVSVGMA-VHDGHPDYERLLQQADRALYQAKNGGRNRCVLHQ 455
            ++ T+S+G+A +     D+  L+ +AD+ALY +K  GRNR  +H+
Sbjct: 272 TIRFTISLGVADLSQPSNDHADLIARADQALYTSKKTGRNRVTVHE 317