Pairwise Alignments

Query, 854 a.a., ATP-dependent chaperone ClpB from Pseudomonas stutzeri RCH2

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score = 1184 bits (3062), Expect = 0.0
 Identities = 595/853 (69%), Positives = 714/853 (83%), Gaps = 2/853 (0%)

Query: 1   MRIDRLTSKLQLALSDAQSIAVGLDHPAIEPLHLMQALLEQQGGSIKPLLMQVGFDIAAL 60
           MR+DR TSK Q+A+SDAQS+A+G DH  IEP+HLM ALL+Q G  I+PLL  +  D+  L
Sbjct: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60

Query: 61  RQALTKELDQLPKLQNPTGDMNLSQDLARLLNQADRLAQQKGDQYISSELVLLAALDSNT 120
           R  L + LD+LPK+    GD+ LS  L  L N  D++AQ++ D YISSE+ LLAA++   
Sbjct: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120

Query: 121 RLGKLLLAQGVSKKALENAINNLRGGDAVNDPNAEESRQALDKYTVDMTKRAEDGKLDPV 180
            LG LL   G+++K +  AI  +RGG  VNDPNAEE RQAL+K+T+D+T+RAE GKLDPV
Sbjct: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLAL 240
           IGRDDEIRRTIQVLQRRTKNNPV+IGEPGVGKTAIVEGLAQRI+N EVP+GL+ +R+L+L
Sbjct: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240

Query: 241 DMGSLIAGAKFRGEFEERLKAVLNDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLK 300
           DMG+L+AGAK+RGEFEERLK+VLN+L+K+EG +ILFIDELHTMVGAGK EG+MDAGNMLK
Sbjct: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH 360
           PALARGELHCVGATTLDEYRQYIEKD ALERRFQKVLVDEP+ EDTIAILRGLKERYE+H
Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360

Query: 361 HGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLI 420
           H V ITD AI+AAA LSHRYI+DRQLPDKAIDLIDEAAS IRM+IDSKPE LD+L+R++I
Sbjct: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420

Query: 421 QLKIEREALKKEDDEATKKRLAKLEDDIAKLAREYADLEEIWKSEKAEVQGSAQIQQKIE 480
           QLKIE++AL  E DEA++KRLA L +++ +  R+YA+LEE+WK+EKA + G+  I+  +E
Sbjct: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480

Query: 481 QAKAELEAARRKGDLARMAELQYGIIPDLERSLEMVDQHGKKENQLLRNKVTDEEIAEVV 540
           QA+ +LE ARR GDL RM+ELQYG IP+LE+ L++  Q   +E  LLRNKVTD EIAEV+
Sbjct: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540

Query: 541 SKWTGIPVSKMLEGERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGS 600
           SK TGIPVSKMLE E++KLLRMED+LH RVIGQ EAV  V+NA+RRSRAGL+DPNRP GS
Sbjct: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600

Query: 601 FLFLGPTGVGKTELCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK LA FLFD+E+AM+R+DMSEFMEKHSVARL+GAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNL 720
           YLTEAVRRKPYSV+L+DEVEKAHPDVFN+LLQVL+DGRLTD  GRTVDF+NTV++MTSNL
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720

Query: 721 GSTQIQELVG--DPGAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLG 778
           GS++IQE     D    +  VMD V+ HFRPEF+NR+DE VVF PLG+E I  IA IQL 
Sbjct: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780

Query: 779 RLRKRLAERELSLELSQEAMDKLIAVGYDPVYGARPLKRAIQRWIENPLAQQILSGQFAP 838
           RLR+RLAER+  LE+  EA+D +  VG+DPVYGARPLKRAIQ+ +ENPLA+ IL+G+F P
Sbjct: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840

Query: 839 GSSVKARVEGEQI 851
           GS +   V+   I
Sbjct: 841 GSPILLSVKDGNI 853