Pairwise Alignments

Query, 653 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (462), Expect = 3e-50
 Identities = 117/346 (33%), Positives = 186/346 (53%), Gaps = 3/346 (0%)

Query: 308 ILLILLIALAIDRLQRQLTRTLGQLVPTLSAWAEGDFAGDARIESKIREIADIESSLNRL 367
           +LLI++  + +    R + R    L   +   A+ + +   +++ K  E  D+   L + 
Sbjct: 89  LLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCK-DEYGDVARELEKT 147

Query: 368 RSYLLDLVGTLRQQATQVAASSRSLDEMS-SDLHEGAQRQTGDTAQIRDSLGELEATIQQ 426
           R  L DL+  L+  A+Q   S   +  MS S+  + AQ +  +  Q+  ++ E+ +T+Q 
Sbjct: 148 RRQLQDLI-KLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQT 206

Query: 427 VADGAGEAAEASRAAAHAVHQGQQVIGQSLTGLHGLVSEVQDNAAAIERLADETTTIGNV 486
           VA+ A  A+  +  A+     GQQ +  +++ +  L  ++  +A A+ ++ +    I +V
Sbjct: 207 VAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSV 266

Query: 487 LTVIRSIAEQTNLLALNAAIEAARAGGHGRGFVVVADEVRSLAQRTSGATEEIQQLIGRL 546
           +  IRSI+EQTNLLALNAAIEAARAG  GRGF VVADEVR+LAQRT  AT EIQ++I +L
Sbjct: 267 VGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQL 326

Query: 547 QQAARQSVEAMRSQVEHAQSTANLAQSADQALDEIVSTIATISRMAEQIAQATAQQGEAV 606
           Q +A  +V  M   V  A     L  +A   LD IV+ +  ++ M  QIA A  QQ    
Sbjct: 327 QSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVA 386

Query: 607 GEIRGHSERIHQLGDANLSHISRGREQSAQMLQLGSELDRATQAFR 652
            E+  +   + +L + +++ ++   E S  M     ELDR   AFR
Sbjct: 387 EEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFR 432