Pairwise Alignments

Query, 653 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  172 bits (437), Expect = 3e-47
 Identities = 103/347 (29%), Positives = 179/347 (51%), Gaps = 1/347 (0%)

Query: 308 ILLILLIALAIDRLQRQLTRTLGQLVPTLSAWAEGDFAGDARIE-SKIREIADIESSLNR 366
           ++L  +I      L  +L    G+L   L +  EG+     R++ S+  E   + +S N+
Sbjct: 294 LILAAIIMFTSAWLINRLISPFGELADMLKSIGEGEGDLSLRLDDSRQDETGSMAASYNQ 353

Query: 367 LRSYLLDLVGTLRQQATQVAASSRSLDEMSSDLHEGAQRQTGDTAQIRDSLGELEATIQQ 426
             +YL   + ++   A  +  +   +D  +  +      Q     Q+  ++ E+  T Q+
Sbjct: 354 FVTYLSKTLQSVSATANDLFQAVERIDNQAKHMEHEINDQVSKIEQVATAIHEMGMTAQE 413

Query: 427 VADGAGEAAEASRAAAHAVHQGQQVIGQSLTGLHGLVSEVQDNAAAIERLADETTTIGNV 486
           +A  A  AAE ++ A  +V+QG Q +  ++  +  +  ++   +  + +LA++ ++I  V
Sbjct: 414 IASSANNAAENAQVADQSVNQGNQSVQNTIASVASMSEQLLTTSETVSQLAEDASSIDTV 473

Query: 487 LTVIRSIAEQTNLLALNAAIEAARAGGHGRGFVVVADEVRSLAQRTSGATEEIQQLIGRL 546
           L VIR ++EQTNLLALNAAIEAARAG  GRGF VVADEVR+LA R+  +TE+I+ +I +L
Sbjct: 474 LEVIRGVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSHASTEDIRHIIEKL 533

Query: 547 QQAARQSVEAMRSQVEHAQSTANLAQSADQALDEIVSTIATISRMAEQIAQATAQQGEAV 606
           Q    + V A+      +Q +   A  + + L  I   I  +S M+ QIA AT +Q   V
Sbjct: 534 QAKTTEVVNAIGQSTNQSQQSQQEASLSGEHLHSIAENIQAMSEMSMQIATATEEQSNVV 593

Query: 607 GEIRGHSERIHQLGDANLSHISRGREQSAQMLQLGSELDRATQAFRF 653
           GEI  H   I  +  ++   + +     + + ++  +L+     F+F
Sbjct: 594 GEINPHVTAIADISRSSSDVVRQTSLDCSDLREMAVQLNELVSRFKF 640