Pairwise Alignments

Query, 464 a.a., replicative DNA helicase from Pseudomonas stutzeri RCH2

Subject, 468 a.a., replicative DNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  553 bits (1426), Expect = e-162
 Identities = 276/457 (60%), Positives = 360/457 (78%), Gaps = 6/457 (1%)

Query: 11  DLETAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIFTLAE 70
           D +  A+KVPPHS+EAEQ+V+GGL+LDN  W+ V + V   DFY   HRLIF  + ++ E
Sbjct: 15  DAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSRPHRLIFDGVKSILE 74

Query: 71  RNSPFDVVTLSEQLDKEGHLPQVGGLAYLGELAKNTPSVANIKAYAQIIRERATLRQLIG 130
              P D++TLSE L++   L  VGG AYL +LAKNTPS ANI AYA+I+ ERA +R LIG
Sbjct: 75  AGKPLDLITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYAEIVAERALVRNLIG 134

Query: 131 ISNEIADSAYAPQGRTGEEILDEAERLIFQIAEAR-PKTGGPVGINDILVKAIDRIDTLF 189
           ++NEIAD+ Y PQGR  E++LD AE  +F IAEAR  +  GP  ++ IL + ++RI+ L+
Sbjct: 135 VANEIADAGYDPQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVDSILERTLERIELLY 194

Query: 190 NA-GEAITGLSTGFTDLDEATNGLQPADLIIVAGRPSMGKTTFAMNLVENAVLRTDKAVL 248
               + +TG++TGFTDL++ T GLQ +DLIIVA RPSMGKTTFAMNL ENA +  DK VL
Sbjct: 195 KTPQDGVTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMEQDKPVL 254

Query: 249 VFSLEMPADSIVIRMLASLGRIDQTKVRAGKLEDDDWPRLTSAVNLLNDRK-LFIDDTAG 307
           +FSLEMPA+ I++RMLASL R+DQTK+R G+L+D+DW R++S + +L ++K ++IDD++G
Sbjct: 255 IFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILMEKKNMYIDDSSG 314

Query: 308 ISPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSSGDNRTNEISEISRSLKGLAKEFN 367
           ++P+E+R+R RR+AREHG +++IMVDYLQLM++P  + DNRT EI+EISRSLK LAKE N
Sbjct: 315 LTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALT-DNRTLEIAEISRSLKALAKELN 373

Query: 368 CPVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADIIMFVYRDEVYHPETEYKGVAEI 427
            PV+ALSQLNRSLEQR +KRPVNSDLRESG+IEQDAD+IMF+YRDEVYHP++  KG AEI
Sbjct: 374 VPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHPDSPLKGTAEI 433

Query: 428 IIGKQRNGPIGTTRLAFLGRYSRFENLAPGSYQFDDD 464
           IIGKQRNGPIG+ RL F G YSRF+N A  +  FDD+
Sbjct: 434 IIGKQRNGPIGSVRLTFQGHYSRFDNYAGPA--FDDE 468