Pairwise Alignments
Query, 720 a.a., His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. from Pseudomonas stutzeri RCH2
Subject, 988 a.a., hypothetical protein from Azospirillum brasilense Sp245
Score = 273 bits (698), Expect = 3e-77
Identities = 237/715 (33%), Positives = 338/715 (47%), Gaps = 99/715 (13%)
Query: 9 SLFRLSPNAY-VLLDRDLVILDANAAYLALTGRKLEDIQGQRLHEAFAADPLSPEMTRVQ 67
+LFR SPN VL D V AN +Y L G + + G+ +HEA PE+ Q
Sbjct: 349 NLFRQSPNFMCVLRGPDHVFELANDSYRQLVGDR--PLIGKPVHEAM------PEVAG-Q 399
Query: 68 ELLDSFARVLSRKAVDTLPVIRYSIARQTPLGPIYEDRYWSATHTPILDEQGEVVAILQH 127
+ RV R + +ARQ P P+ E+R+ + + PI D G V I
Sbjct: 400 GFFELLGRVYDRGKPFVGHALPVRVARQ-PGAPV-EERFITFIYQPIKDADGRVTGIFCE 457
Query: 128 TSDITELQAIKDSVSQAAGGRQPVQQLEQSVMSRAKLLQSEGEQLRRLFAQAPGFVCFLR 187
SD+TE + +D++ R LEQ V R ++ +++ RL V +
Sbjct: 458 GSDVTEAKRAEDAL------RDLNATLEQRVAERT----ADRDRMWRLSTD----VMLVA 503
Query: 188 GPRHVYELVNDAYRQVIG--HRQLLGKTIRDGLPEIEGQVLIGLLDDVYRT----GQPYI 241
VN A+ ++G +L + D + DD+ RT +
Sbjct: 504 RFDGTINAVNPAWTSLLGWTEEELAARNFLDFVHP----------DDLERTRAEAARLGA 553
Query: 242 GKRVSLFLKRQPEREPEEVILDFVLQPIVENDGKVIGIFVQGQDVTEQQRNEMELRRYRD 301
G F R ++ + L +V P D + I G+D+T Q+ + LR+
Sbjct: 554 GHTTPRFENRYRHKDGRYLWLSWVAVP----DDRF--IHAVGRDITAQKEADATLRQ--- 604
Query: 302 HLEELVRERTLALQQSEAERQMTEQALLQAQRLEAVGKLTGGIAHDFNNMLQIIGGNLQL 361
TE+ L QAQ++EAVG+LTGG+AHDFNN+LQ + G L +
Sbjct: 605 ----------------------TEEQLRQAQKMEAVGQLTGGVAHDFNNLLQALEGCLSM 642
Query: 362 LRRSLGSDETAARRLDSAVSGVEKGARLASQLLAFASRQPLLPQQVHLPDLLEQMHELLN 421
+ R G + A LD+ V +GA+L QL+AFA R L P+ + + D + M LL
Sbjct: 643 IGRRTGEPQVHA-LLDAGQQAVGRGAKLVQQLMAFARRDSLRPESIGVRDRVLAMSALLE 701
Query: 422 GALGSAVQLELQVLGRPWPVFVDVGNLQSVVLNLAANARDAMSGGGRVVLRLENRLLGAD 481
AL + + L+L++ WPV VD + V+NLA NARDAM GGR+ + N +
Sbjct: 702 RALRADIALDLRLGDDLWPVEVDPTQFELAVINLAVNARDAMPSGGRLTVEAVNSVFSPG 761
Query: 482 VPVGQGGGYVLLSVIDEGSGMTEDVRARAFEPFFTTKQNSNASGLGLSMVYGFVKQSGGF 541
P G G ++ LSV D G GM V ARAFEPFFTTK +GLGL+ VYG +Q+GG
Sbjct: 762 DPRGVEGEFLHLSVSDTGCGMPAAVAARAFEPFFTTKDLGKGTGLGLAQVYGLARQAGGT 821
Query: 542 VTLESGEQGGTAVHVHLPRH---VENEPQLPGQGGDGAVESIQDDASRSAPESGADSVDG 598
++S GT VH+ L R EP LP A+ P GA
Sbjct: 822 AWIDSAPDHGTTVHLLLRRSGVAPAVEPALP--------------AAIVPPSVGARRHG- 866
Query: 599 SLRILFVEDDPTLRMLTGEVMMELGHEVVASETAEEALEILERQPFDVLLTDVGL-AGMS 657
R+L VEDDP + M + + G V+++ AEEAL L DVLL+DV + GMS
Sbjct: 867 --RVLVVEDDPIVAMTVSTALEDAGFAVLSAANAEEALPHLADDGVDVLLSDVVMPGGMS 924
Query: 658 GIDLAREAGTRLPRLSLVIASGYPVNASDVG-LDRLRTMLKPYDIHQVRELLDGI 711
GIDLAREA R P L +++A+GY + D+ + + KPY I + +D I
Sbjct: 925 GIDLAREARERRPGLPVILATGY---SEDIARATGIPVLAKPYRIDDLVGRIDAI 976
Score = 149 bits (375), Expect = 9e-40
Identities = 74/159 (46%), Positives = 102/159 (64%)
Query: 153 QLEQSVMSRAKLLQSEGEQLRRLFAQAPGFVCFLRGPRHVYELVNDAYRQVIGHRQLLGK 212
Q E+S+ L +EGEQ+R LF Q+P F+C LRGP HV+EL ND+YRQ++G R L+GK
Sbjct: 328 QAEESLHRANARLAAEGEQMRNLFRQSPNFMCVLRGPDHVFELANDSYRQLVGDRPLIGK 387
Query: 213 TIRDGLPEIEGQVLIGLLDDVYRTGQPYIGKRVSLFLKRQPEREPEEVILDFVLQPIVEN 272
+ + +PE+ GQ LL VY G+P++G + + + RQP EE + F+ QPI +
Sbjct: 388 PVHEAMPEVAGQGFFELLGRVYDRGKPFVGHALPVRVARQPGAPVEERFITFIYQPIKDA 447
Query: 273 DGKVIGIFVQGQDVTEQQRNEMELRRYRDHLEELVRERT 311
DG+V GIF +G DVTE +R E LR LE+ V ERT
Sbjct: 448 DGRVTGIFCEGSDVTEAKRAEDALRDLNATLEQRVAERT 486
Score = 26.6 bits (57), Expect = 0.006
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 21/127 (16%)
Query: 195 LVNDAYRQVIGHRQLLGKTIRDGLPEIEGQVLIGLLDDVYRTGQPYIGKRVS-------- 246
L ND Y + G + PE G+ + D++ +P + + +S
Sbjct: 68 LYNDGYVPIFGAKH----------PEALGRPFAEVWWDIWPQIKPLVDRTLSGEASWYED 117
Query: 247 LFLKRQPEREPEEVILDFVLQPIVENDGKVIGIFVQGQDVTEQQRNEMELRRYRDHLEEL 306
L + + E+ F P+ DG++ G+F + T Q + RR HL+
Sbjct: 118 LLIPMERRGFREDAWFTFSYTPVRGEDGRIPGMFCAAIETTSQ---VLAARRTDFHLKLE 174
Query: 307 VRERTLA 313
R R L+
Sbjct: 175 ARLRQLS 181