Pairwise Alignments

Query, 332 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

Subject, 329 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  381 bits (978), Expect = e-110
 Identities = 186/322 (57%), Positives = 235/322 (72%), Gaps = 6/322 (1%)

Query: 3   AAPETLEIGLLLYPGAQLAAVYGLTDLFSVANRMAAERGAAKLPTLRVTHWSLQDGTSGI 62
           A P   EIGL+LYPG Q+A V+G+TDL  +A + +AERG    P  R+THW LQD    +
Sbjct: 6   ALPSKAEIGLMLYPGCQMAMVHGMTDLIGIAGQFSAERGG---PVARITHWRLQDDGC-L 61

Query: 63  QRVFDSLP--GSQRSPRIIILPPCLEARPEAHVIQPFAAWLGQCHQAGVTLGSVCAGAFL 120
            R FD+ P  GS+ +P I+++P  L    EA    P+A WL   H  G TL S C G F+
Sbjct: 62  ARCFDTHPELGSREAPEILLVPGRLTGPMEAEEAAPYARWLLDRHAKGATLASTCGGTFV 121

Query: 121 LAETGLLDGRTVTTHWGLAQALRERFPNVQVDADRMIVDDGDIITAGGLMAWTDLGLALV 180
           LA TGLL GR  TTHW  A A R+RFP+V++D D+++++DGDIITAGGLMAWTDLG+ LV
Sbjct: 122 LAATGLLKGRPATTHWLFANAFRDRFPDVRLDPDKIVIEDGDIITAGGLMAWTDLGMRLV 181

Query: 181 ERLLGPTIASETARYLVIDLTRQSQRYFSSFAPRLDHGDEAVLRVQRWLQSQSASAVPVA 240
           +RL GPT+  ET R+L+ID   + QR++SSF+PRL+HGDEA+L+VQ WLQ++ A AV VA
Sbjct: 182 DRLFGPTVTVETGRFLLIDPAGREQRHYSSFSPRLNHGDEAILKVQHWLQTREARAVSVA 241

Query: 241 AMAAQAGMGERTFLRRFRAATGLKPTEYCQQLRVGKARELLELTNRGIEQVAWAVGYQDP 300
            MA    M +RTFLRRF+AATG+KP EY Q LRVGKARELLE T R +EQ+AW+VGY+D 
Sbjct: 242 EMAKVVAMEDRTFLRRFKAATGMKPIEYAQHLRVGKARELLEFTKRSVEQIAWSVGYEDA 301

Query: 301 GAFRKVFQRLVGLSPGDYRRRF 322
            AFRK+F R+VGLSPGDYR RF
Sbjct: 302 AAFRKLFHRIVGLSPGDYRHRF 323