Pairwise Alignments

Query, 84 a.a., RNA chaperone Hfq from Pseudomonas stutzeri RCH2

Subject, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

 Score =  124 bits (310), Expect = 3e-34
 Identities = 60/68 (88%), Positives = 65/68 (95%)

Query: 1  MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS 60
          M+KG SLQDP+LN LR+ER+PVSIYLVNGIKLQGQIESFDQFVILLKNTV+QMVYKHAIS
Sbjct: 1  MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS 60

Query: 61 TVVPGRPV 68
          TVVP RPV
Sbjct: 61 TVVPARPV 68